Panicum hallii (Hall's panicgrass): 112892309
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Entry
112892309 CDS
T07366
Name
(RefSeq) probable polygalacturonase At1g80170
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00040
Pentose and glucuronate interconversions
phai01100
Metabolic pathways
Module
phai_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112892309
Enzymes [BR:
phai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
112892309
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Cytomega_UL20A
NosD
Beta_helix
Motif
Other DBs
NCBI-GeneID:
112892309
NCBI-ProteinID:
XP_025815257
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Position
5:56094135..56096823
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AA seq
392 aa
AA seq
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MAAMTRALLLLFALAIRSAGGQQRVHNVIDFHAAGDGKTDDAQAFLGTWQAACSDAGEPV
MAVPGGRAFLLSQVSFQGPCKSPITVKLDGNIVAPNHIWTKEAANLLTFLGVDHLTLDGN
GGIDGQGAIWWDCYNRKKCHARPILLGFARCNNLTVRRIHLKDSADKHMTLFQCSQVNVD
SVSVTAPADSPNTDGITVALSNNTYISNTSIQTGDDCVSVLSYTKNITVTQSRCGPGHGI
SVGSLGRSETAMVEQITVSNCSFIGTMTGVRIKSWQGGKGYAKGFLFQSLNMTEVQYPIV
IDQFYCPQGNCPIKHGGVAISDARFIDIQGTSSEQEAIRLLCSQSVHCQGIYLSNINLSW
VNHTSPANATILNAHGSTGGMVVPRIQFSDFL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgatgacacgcgccttgctgctgctgttcgcactggccatacggtcagcagga
ggacagcaacgcgtccacaacgtcatcgacttccacgcggccggggacggcaagacggac
gatgcgcaggcgttcctggggacatggcaagcggcttgcagcgacgcgggcgagccggtc
atggccgtccccgggggaagggcgttcttgctgagccaggtctcgtttcagggtccctgc
aagtcaccgataaccgtaaagctggatggcaacattgtggcgccaaaccacatttggacc
aaagaggcagccaacctcctgaccttcctcggcgtcgaccacttgacgttggatgggaat
ggcgggatcgacggccaaggcgccatctggtgggattgctacaaccggaagaaatgccac
gcccggcctattttgctgggtttcgcacggtgcaacaatctaacggtgagaaggatacat
ctgaaggacagtgcagacaagcacatgaccttgttccagtgcagccaggtgaatgtggac
agtgtctccgtaacagcgccagcggatagccccaacacagacggcataactgtggcattg
tctaacaacacctacatctccaacacctcaatccaaacaggagatgactgcgtttcagtc
ctatcatacaccaaaaatattaccgtcactcaaagcaggtgtgggcctggccatggcatc
agcgtgggaagccttggaagatctgagacggcaatggtggaacaaatcacagtatctaat
tgcagcttcattgggactatgactggagtgaggatcaaatcctggcagggtgggaagggt
tacgcaaaaggattcctttttcagagcctcaacatgactgaagttcagtatcccattgtc
atcgaccagttctactgtccacagggaaattgtcctataaagcatggtggtgtggcaata
agcgacgcaagatttatcgacatccaagggacatcctccgagcaagaagccatcagatta
ctgtgcagccagagtgtccattgccaaggcatctatctcagcaacattaacctctcttgg
gtgaaccatacttccccagcaaatgccactattttgaatgcccatggaagcactggaggc
atggtggtaccaagaatacaattttcagattttttgtag
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