Panicum hallii (Hall's panicgrass): 112892447
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Entry
112892447 CDS
T07366
Name
(RefSeq) long chain acyl-CoA synthetase 4-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00061
Fatty acid biosynthesis
phai00071
Fatty acid degradation
phai01100
Metabolic pathways
phai01212
Fatty acid metabolism
phai04146
Peroxisome
Module
phai_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
112892447
00071 Fatty acid degradation
112892447
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112892447
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
phai01004
]
112892447
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phai04147
]
112892447
Enzymes [BR:
phai01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
112892447
Lipid biosynthesis proteins [BR:
phai01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
112892447
Exosome [BR:
phai04147
]
Exosomal proteins
Exosomal proteins of breast milk
112892447
Exosomal proteins of breast cancer cells
112892447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-GeneID:
112892447
NCBI-ProteinID:
XP_025815393
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Position
5:complement(13682991..13697909)
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AA seq
762 aa
AA seq
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MAAARSDDPEPRLFIRLVEAQGLDPPGVALADVRSPIFELAVEADRIPEGKRGPCAGGGD
AMLRVSYPMASSWPGPSPTPHSLRLRTKSKADAAANSRAAARRGEQEMQNVVEVEPGRPA
ADGRPSVGPTYRSAFARDGFPPPVPGLDSCYDIFRMAVEKYPDNRMLGHREIADGKAGAY
VWKTYREVFDIASKIGNSIRSCGLAKGSRCGIYGVNCPEWIITMEACNAHGIYCVPLYDT
LGAGAVEFILCHAEVEIAFAEEKKIELLLKTLPKSNEFLKTIVSFGKVTQEQKEEASKYG
LSIYSWDEFLSLAADQEFDLPDKEKTDICTIMYTSGTTGDPKGVLISNESIICLIAGVDR
LLNCVNEELAESDVYMSYLPLAHIFDRVVEELFIFHGASIGFWRGDVKLLVEDIGVLKPT
ILCAVPRVLDRIFSGLQAKISSGGFIKSTLFNLAYKFKQFRMMRGAKHDEAAAICDKVVF
SKVKEGLGGNVRVILSGAAPLATHVEEYLRVVTCAHVIQGYGLTETCAGSFVSLPNQMSM
IGTVGPPVPNIDVRLESVPEMDYDALASTARGEICIKGKTLFAGYYKREDLTKEVLVDGW
FHTGDIGEWQPDGSMKIIDRKKNIFKLSQGEYVAVENLENIYGLVSAIDSIWIYGNSFES
FLVAVVNPNKEALESWAAANGISGDFESLCQNPKAKEYILGELSRIGKEKKLKGFEFIKD
VHLEPVPFDMDRDLITPTYKKKRPQLLKYYQGVIDNMYKSAK
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcacgctccgacgacccagagccccggctgttcatccggctggtcgaggcc
caggggctggatccaccaggcgtcgcgctcgcggacgtgcgttccccgatcttcgagctg
gccgtggaggccgatcggatcccggagggcaagcgggggccctgtgccggaggcggggac
gccatgctgcgggtctcgtaccccatggcgtcatcctggcctgggccctcccccaccccc
cactcgctgcgactgcgaacgaagtccaaggcagacgctgccgcgaattcacgagcggcg
gcgaggagaggagaacaggagatgcagaacgtggtggaggtcgagccggggcgcccggcc
gccgatggccgcccctccgtggggcccacctaccggagcgccttcgcccgtgacgggttc
ccgccccccgtccccgggctggacagctgctacgacatcttccgaatggcagtggaaaag
tatccagacaacagaatgcttggccaccgtgagattgctgatggaaaggctggcgcatac
gtctggaagacatacagggaggtttttgacattgcaagcaaaattggtaactctattagg
agctgtggacttgcaaagggtagtcgttgcggtatctatggtgttaattgtcctgagtgg
attatcacgatggaggcttgcaatgcccatggaatctactgtgtcccattatatgacaca
ctcggagctggtgctgtagagtttattctatgccatgcagaagtcgagattgcttttgct
gaggaaaagaaaattgagctgctcttaaagaccttacccaagtcaaatgagttcttgaaa
acgattgtgagttttggcaaggtaactcaagaacaaaaggaagaagcttccaaatatggg
ctgtcaatctactcatgggatgaatttctgtccctggcggctgaccaagaatttgatctt
ccagacaaggagaagacagatatatgcactataatgtatactagtggaactactggtgac
ccaaaaggagtattgatatccaatgaaagcattatttgtctcatcgcaggtgtggatcgg
ctacttaactgtgtaaacgaggagctggcagaaagcgatgtttacatgtcttaccttcct
cttgcgcacatctttgatcgtgttgtggaggagctgtttattttccatggtgcctctatt
ggattctggcgtggggatgttaagctgctagttgaagatattggtgtgctgaaaccaaca
atcttgtgtgctgtcccacgtgttcttgatcggatattttctggactacaagctaaaatt
tcctctggcggttttataaagagtacactattcaatcttgcttacaaattcaagcagttt
agaatgatgagaggagctaagcacgatgaagctgccgccatatgtgacaaagtagttttt
agtaaggtgaaagagggtctcggtggcaatgttagagttattttatctggagctgctcca
cttgctacccatgttgaagaatacttgcgagtggtgacgtgcgcacacgtcatacaagga
tacggtctcacggaaacttgtgctggatcttttgtctcgttgccaaatcagatgtccatg
ataggaactgttggtcccccggtgccaaatattgatgttcgtctggagtctgtcccagaa
atggattatgatgcacttgcgagcacagctcgtggagaaatctgcatcaagggtaaaaca
ttattcgcaggatactacaagcgtgaagaccttacaaaggaggtcttggttgatgggtgg
ttccatactggtgacattggtgagtggcaacctgatggaagtatgaaaatcatagatcgc
aaaaagaatatattcaaactctcacagggagaatacgtggcagttgaaaatttggagaat
atttatggccttgtttctgctatagactcgatatggatatatgggaacagctttgaatcc
ttccttgttgctgtggtcaatcccaacaaggaggctcttgagagttgggctgcagcaaat
ggaataagtggtgattttgagtccttgtgccagaatccaaaagcaaaagaatacatttta
ggagaactgtcaagaataggaaaagagaagaagctcaaaggttttgaattcatcaaagat
gtacacctcgaaccagtgccctttgatatggatcgcgacttgatcactccaacatacaaa
aagaaacggccgcagctgctcaagtactaccagggcgtgattgacaacatgtacaaaagt
gccaagtga
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