Panicum hallii (Hall's panicgrass): 112892464
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Entry
112892464 CDS
T07366
Name
(RefSeq) uncharacterized protein LOC112892464
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112892464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112892464
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112892464
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112892464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-C3HC4_3
ZnF_RZ-type
Motif
Other DBs
NCBI-GeneID:
112892464
NCBI-ProteinID:
XP_025815408
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Position
5:complement(15030242..15031321)
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AA seq
303 aa
AA seq
DB search
MEGEGGGGNTAGETMGEARQDAGEMITGSIAVEAFGCHVRAKPLGPPMFECPVGHFFVCS
SCRDNLPQDKCKFCSGSSTLARSLGMERAVRSILVGCCYADRGCTEKTAYYDKDEHEMAC
PHAPRFCPGSPAAAASSPGRRRSSWTTAPATTSGRRPSSATVCRLICASSNQARTSSVAR
DDDDQLFLVNVRPAARPPGHAVSLVCVPPCLEPTGFGCTVSFSCIRLHRGTSTLDDLQPL
RLSDWPPTECICVVPKAWQHDGQNDDDGVVLTITIVRAFPLEDDDNPYDMSYIESDEDDS
DSS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggagggagaaggcggcggcggcaacaccgccggcgagacaatgggagaagctcggcaa
gatgctggtgagatgattacaggcagcatagcggtggaggccttcggctgccatgtccgc
gctaagcccctcgggcctccgatgttcgagtgtcccgttgggcatttcttcgtctgctcg
tcctgccgcgacaatctgcctcaagacaagtgcaagttctgctccggatcgtctaccctc
gcgcgcagcctcggcatggagcgcgccgtccgatccatcctagtcggctgctgctacgcc
gaccgcgggtgcaccgagaagaccgcctactacgacaaggacgagcacgagatggcgtgc
ccgcacgcgccgcgcttctgcccggggagcccggctgcggcggcttcgtcgccgggacgg
cggcggagctcctggaccaccgcaccggccaccacaagtggccgtcgaccaagttccgct
actgtgtgccgtttgatctgcgcgtcgtcgaaccaggcacgcacgtcctccgtggcgcgc
gatgacgacgaccagcttttccttgtgaacgtccgaccggcggcgcggccgcctgggcac
gccgtctccctcgtctgcgtgccgccctgccttgagcccacaggattcgggtgtacggtg
tctttctcgtgcattaggctccatcgcggcacttcgacgttggacgatctgcagcccttg
cggctttctgattggcctccgacggaatgcatctgtgtggtgcccaaggcttggcaacac
gacggacaaaacgacgacgacggtgtcgtgctcaccatcaccatcgtgcgcgctttccct
cttgaagatgatgacaacccgtacgacatgagctacattgagagcgatgaggatgacagt
gatagttcgtga
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