Panicum hallii (Hall's panicgrass): 112892492
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Entry
112892492 CDS
T07366
Name
(RefSeq) uncharacterized protein LOC112892492
KO
K14315
nucleoporin NDC1
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112892492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112892492
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112892492
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
112892492
NCBI-ProteinID:
XP_025815428
LinkDB
All DBs
Position
1:52504265..52508872
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AA seq
499 aa
AA seq
DB search
MDRAPPRGSPRDAVGQRWLAVFAFQAVLSAAASALHLALSPRGRRHPLLGVPAGLLLALH
PLLACAATGLLALALLLTASPRPRPPPLQRRALATALLAAAGALSVGAAAAILPEDARWA
AVAGLGFRGAVLGAVFAAHYFGRGRWLLQFPVVQRPLFYGLKMGLLPSGKRALKVSLQAF
CLSFVLILLLPQQFRIGGSIGSQILTQISIFIVTAGVSFCLEISHHFVQVVHTRRCSFAP
PQSTAAAETNPTEFILETLEQSDPRSLIQYLAYQDLCMVSECNLEPWRRGAFFEESGETY
KRIVTACLKPLEEFTSIIAKALEEYSPDSLSQQSILFSAFDDSQICTWCARTLSGLTARS
RQEDRYGVAQLTGCNAAVMTTLLSALLVIEACLGKKTNPQPALGPENIKWANFSTGRKGT
AIAIASTQKGGLHKKVYAMADVLRTSVYQIVSAFIDDLRANAKPASLEKNWISEGRKPVY
GSQAVLVQKLSLFIEYRAV
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggaccgggccccgccgcgcggctcgccccgcgacgccgtgggccagcggtggctcgcc
gtcttcgccttccaggccgtcctctcggccgccgcctcggcgctccacctcgcgttgtcc
ccgcgcggccgccgccacccgctcctcggcgtccctgccggcctcctcctcgcgctccac
ccgctcctcgcctgcgccgccacggggctcctcgcgctggcgctcctcctcaccgcgtcc
ccgcgcccgcgcccgcccccgctgcagcggcgcgcgctcgcgaccgccctcctcgccgcg
gccggcgcgctctccgtgggcgccgccgcggcgattctccccgaggacgcccggtgggcg
gcggtcgctgggctcgggttccgcggggctgtgctgggtgccgtcttcgccgcgcactac
ttcggccgtgggaggtggttgctccagttccccgtcgtgcagcgacctctattctatgga
ttgaagatggggcttctgccatctggaaaaagggccctgaaagtgtcacttcaggccttc
tgcctttcctttgttctgattttactacttcctcagcaattcagaatcggaggctctatt
ggaagccaaatactcactcagatcagcatttttatagtcacagctggggtttccttctgt
ttggaaataagccatcattttgtccaggttgtacatacaaggaggtgcagttttgctcca
cctcagagcactgccgctgcagagactaatcccacggaatttatcctggaaacattggaa
caaagtgatccaagatcattaatacaatatcttgcttaccaagatttgtgtatggtatct
gagtgtaacttggaaccttggcgccgaggtgccttctttgaggaatctggtgaaacttat
aaaagaattgtgacagcttgtttgaagccacttgaggagtttacttcaataattgctaaa
gcccttgaagagtattcgccagattcattgtcacaacagtccatactcttcagtgcattt
gatgattctcagatatgcacatggtgtgctcggacattgtcaggattgactgcacgctca
cgccaggaggaccgctatggagttgctcaactcactggctgcaatgctgccgtgatgacc
acattactgtctgctctattggtaattgaggcatgtttaggaaagaaaacgaacccacag
cccgcactgggtcctgaaaacattaagtgggctaacttctccacaggacgaaaaggaact
gcaattgcaattgcaagcacgcaaaaaggtggtttgcacaagaaagtttatgctatggct
gatgttcttcgaacttcagtttatcagatagtttcagcattcattgatgacctgcgagca
aatgcaaaaccagcaagtttggagaagaattggatcagtgaagggaggaagccagtatat
ggttcgcaagcagtgttggttcagaagttgagtttatttattgagtaccgtgctgtctga
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