Panicum hallii (Hall's panicgrass): 112892793
Help
Entry
112892793 CDS
T07366
Name
(RefSeq) uncharacterized protein LOC112892793
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112892793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112892793
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112892793
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112892793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
112892793
NCBI-ProteinID:
XP_025815692
LinkDB
All DBs
Position
5:complement(54026636..54027299)
Genome browser
AA seq
178 aa
AA seq
DB search
MAKQHKRGSPLDNGEHAQSSKKPRAQASPTAVVKCELPEGGRRREEQLEEGEVGQGGGAG
AVVAMEVIEEPQLNNLRMGLALFHCRACQLPLEPPTFQVRPAEVDAFVRDAKLPCPFQEH
GCARYVVYYQASEHERTRPWAPCYCPGCNAFTSPPRLLEHFRAGHPSWPVTDVSYGKP
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcagcacaagaggggatccccgctggacaatggcgagcacgcccaaagcagc
aagaagccgagagcgcaggcctcgcccaccgccgtggtcaagtgcgagctgccagaagga
gggcgaagaagagaagagcagctagaggaaggagaagttggccaaggcggcggtgccggg
gctgtggtggcgatggaagtcattgaggagccgcagctcaacaatttgaggatgggactc
gccttgttccactgccgagcttgccagcttcccctcgaacctcccacgttccaggtgaga
cctgccgaggtggacgccttcgtgcgcgacgccaagctgccatgcccgttccaggagcac
gggtgcgcgaggtacgtcgtctactaccaggccagcgaacacgagcgcacgcgcccgtgg
gctccctgctactgcccgggctgcaacgccttcacctcgccgccgaggctgctcgagcac
ttccgcgcaggccacccgtcctggcccgttaccgacgtgagctacgggaagccgtaa
DBGET
integrated database retrieval system
