Panicum hallii (Hall's panicgrass): 112892794
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Entry
112892794 CDS
T07366
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112892794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112892794
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112892794
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112892794
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
112892794
NCBI-ProteinID:
XP_025815693
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All DBs
Position
5:54032371..54036832
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AA seq
326 aa
AA seq
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MEKRSGARATKEKENATTKKPRMLRKAPMATKEQQQDEGEKHRTLSVILDLDTCRYKSLY
RMLVPDLGISSSKLNTLNIPLDGQPCKNGHAACEACCARTHRVCPSCIEPIGDIRCRPLE
NAIAGMLVPCAFAEHGCTRRLRFAEKPVHEALLCQHAPCACPVPGCAYAGLELRDHIQDA
HAAAGDGDDNDNDVVSFAGSAAVTLRRGTPFRVLLHETDGRVFLLLNGGGVPSGRSLSVV
CVGPRPGGNRSLEYTLQVGGSGGGEPGALALSASGPVPCTRLWAGHHPTETFLFVPDAYW
GSSGSLNVTIHFQCGMWISLPWMLIT
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaggagcggcgccagggccacgaaggagaaggagaacgccacgacgaagaag
ccgaggatgctccggaaagcacccatggccacgaaagagcagcagcaagacgaaggcgag
aaacacaggaccctcagcgtcattctcgacctcgacacgtgcagatacaaatcactatac
agaatgttggttcctgatctcggcatctcctcgtctaaacttaacaccttgaatatacct
ctcgatgggcagccgtgcaagaacgggcacgccgcgtgcgaggcctgctgcgcccgcacc
caccgggtgtgcccgtcctgcatcgagcccatcggcgacatccggtgccggccgctggag
aacgccatcgcgggcatgctggtcccctgcgcgttcgccgagcacggctgcacgcggcgc
ctcaggttcgccgagaagccggtccacgaggcgctcttgtgccagcacgccccgtgcgcg
tgccccgtcccggggtgcgcctacgccggcctggagctccgcgaccacatccaggacgcg
cacgccgcggcgggcgacggcgacgacaacgacaacgacgtcgtcagcttcgccgggtcc
gcggcggtgacgctgcgccgcggcacgccgttccgggtgctcctgcacgagacggacggg
cgcgtcttcctgctgctcaacggcggcggcgtgccctccgggcggtcgctgtccgtggtc
tgcgtcggcccccgccccggcgggaacaggtccctggagtacacgctgcaggtcggcggc
agcggcggcggcgagcccggcgcgctcgcgctgtcggcgtcgggccccgtgccgtgcacg
cgcctctgggcggggcaccacccgaccgagacgttcctgttcgtgccggacgcgtactgg
ggctcctccggatcactgaatgttacgatacattttcaatgtggaatgtggatctctctc
ccgtggatgctaattacttag
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