Panicum hallii (Hall's panicgrass): 112892796
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Entry
112892796 CDS
T07366
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112892796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112892796
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112892796
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112892796
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
112892796
NCBI-ProteinID:
XP_025815694
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All DBs
Position
5:54059227..54061287
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AA seq
266 aa
AA seq
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MRSGAAATSVTLELDVLDCTVCWLPLCRPCAVGHLIRSSCLAKLPNRKKCHTCSRKGYYN
RCYSMEKVLGSMQVPCSNARYGCTVKTSYHQKQDHEATCPHELCFCPGSGCDFSGRSPAT
LLRHFTDHGWPSTEFSYGASFRVAAQEEVRVLVGDDDHLFLLAVEPSEPSGCVLVSVVSV
RPRDAKPEFRCSMYLGSWKNRSRTESKFQVPSTTFSGGMGTPQDCVMFSVPKFYLEKDSK
ISVMSSCTKTTAEASLECSAVDQQIS
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgaggagcggcgccgccgccaccagcgtcaccttggagctggacgtcctcgactgcacc
gtctgctggctgcccttgtgccgtccatgtgccgtggggcatctcatacgctcatcctgc
cttgccaagctcccaaacaggaagaaatgccacacctgctcccgcaaaggctactacaac
cgctgctactccatggaaaaagtcctcggatctatgcaggttccttgctccaacgccagg
tatggctgcaccgtgaagaccagctaccaccagaagcaggaccacgaggcgacatgcccc
catgagctctgcttctgccccggaagcggttgcgacttcagcggacgatcacccgcgacg
ctccttcgccacttcaccgaccacggctggccctccaccgagttcagctacggggcctcc
ttccgcgtcgccgcgcaggaagaggttcgcgtcctcgtcggcgacgacgaccacctgttc
ctgctcgccgtggagccgtcggagccgtccggctgtgtcctcgtctcggtggtctccgtg
cggcctcgcgacgccaagcccgagttccggtgttccatgtacttgggctcctggaagaac
cggagccgcaccgagtccaagttccaggtgccaagcacgacgttctctggcgggatgggg
acgccacaggactgcgtcatgttcagcgtgcccaagttctacctggagaaggacagcaag
atcagtgtcatgtcatcatgcacaaagaccacggctgaagcctctctagagtgctcagcg
gtggaccagcagatcagctga
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