Panicum hallii (Hall's panicgrass): 112892859
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Entry
112892859 CDS
T07366
Name
(RefSeq) cryptochrome-1-like isoform X1
KO
K12118
cryptochrome 1
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
112892859
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Motif
Pfam:
FAD_binding_7
Cryptochrome_C
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
112892859
NCBI-ProteinID:
XP_025815752
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Position
1:47736774..47740598
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AA seq
705 aa
AA seq
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MPASQSSMSGAGEAGVRTVVWFRRDLRVEDNPALAAAARPAGEVVPAYVWAPEEDGPYYP
GRVSRWWLSQSLKHLDASLRRLGASRLVTRRSADAVVALLDIVRSTGATQLFFNHLYDPL
SLVRDHRVKELLTAEGITVRSFNSDLLYEPWEVLDDDGCPFTMFAPFWNRCLCMPDPAAP
LLPPKKINSGDLSRCVSDELIFEDESERGSNALLARAWSPGWQNADKALTAFLNGPLIDY
SVNRKKADSASTSLLSPYLHFGELSVRKVFHQVRMKQLMWSNDGNHAGEESCTLFLRSIG
LREYSRYLTFNHPCSHEKPLLSHLRFFPWVVNEVYFKVWRQGRTGYPLVDAGMRELWATG
WLHDRIRVVVSSFFVKVLRLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRELDR
IDNPQFEGYKFDPHGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGVELGSNYPRPIV
ELDEANSKLQGALSEMWELEAASRAAMENGMEEGLGDSSDAPPIDFPQELQMEVDRQPVR
PTQTPMMAGRRREDQMVPSMTSSFIRAETELTADFGNISEDSRPEVPSNMHLQPRMEREE
TVDGGAGNGVRMNGNYHQQNLQNNTRRVLGVAPSVSEASSSWTGREGGVVPVWSPPAASG
HSDPYAADDADISSRNYLDRHPQSHTMMNWSQLSQSLTTGWEVDK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgtcgcagtcgtcgatgagcggcgccggggaggcgggggtgcggacggtggtg
tggttcaggcgggacctccgggtggaggacaacccggcgctggcggcggccgcgcggccg
gccggggaggtggtgccggcctacgtgtgggcgccggaggaggacgggccctactacccc
ggcagggtgtcccggtggtggctcagccagagcctcaagcatctcgacgcctcgctccgc
cggctcggcgctagccgcctcgtcacccgccgttccgccgacgccgtcgtcgccctgctc
gacatcgtccgcagcaccggcgccacgcaactcttcttcaaccacctctacgacccactg
tcgctggtccgggaccaccgcgtgaaggagctgctgacggccgagggcatcaccgtgcgg
tccttcaactccgatctgctgtacgagccgtgggaagtcctcgacgacgacggctgcccc
tttaccatgttcgcgccattttggaacaggtgcctgtgcatgcccgaccccgcagcgcca
ctgctgccgcccaagaagatcaattcaggtgacttgtcgaggtgcgtatccgacgagctg
atctttgaagacgagtccgaaaggggaagcaatgcgctgctggcacgggcctggtcaccg
gggtggcagaacgctgacaaggcgcttacagctttcctcaatggcccgttgattgactac
tccgtgaaccgcaagaaggccgacagcgcaagcacctccctgttgtccccgtacctgcac
tttggtgagctcagtgtccgcaaggtcttccaccaggtccggatgaagcagctgatgtgg
agcaatgatggcaaccacgctggcgaggaaagctgcactttgttccttcgctccatcggc
ctgcgggagtactcgaggtacctcaccttcaatcatccctgcagccacgagaagccgctc
ctgtcgcacctcaggttcttcccttgggtcgtcaacgaggtatacttcaaggtttggagg
caggggaggaccggctaccctcttgtcgacgctggcatgagggagctctgggcaacaggg
tggcttcacgatcgcatacgtgtggtggtctctagcttttttgtcaaggtgctccggttg
ccatggcgctgggggatgaagtacttctgggacaccttgctggatgctgacctcgagagt
gacgccctaggttggcagtacatttctgggtccctccctgatggccgtgagcttgaccgc
atcgacaaccctcagtttgaagggtacaagtttgacccacacggggagtatgtccggcga
tggctaccagaactggcgaggctgccaacggaatggatacaccacccctgggatgcacct
gagtctgtgcttcaggctgcgggagttgagctaggctccaactatcctcgccccattgtt
gagttagatgaagccaattccaagttacagggtgccctgtcagaaatgtgggagcttgag
gcggcctctcgggctgcgatggaaaatggaatggaagaaggtcttggcgactcctcggat
gcgccaccgattgacttccctcaagaattacagatggaagtggaccgacagccggtccga
cctacccagacaccgatgatggcaggtcggagacgagaagatcagatggtgcctagcatg
acttcctcattcattagagctgaaacagaactcactgcggattttggcaacattagcgag
gacagtaggccggaggtgccatcaaacatgcatttgcagcctcgaatggagagagaagaa
acggttgacggtggcgctggcaatggtgtgaggatgaacggcaattatcatcagcaaaac
ctacagaacaacacacgccgggtgctaggtgttgctccatcggtttcagaggcatcgagc
agctggacgggcagagaaggtggggtggtaccggtctggtcaccaccggcagcttcagga
cattctgatccttatgctgccgatgatgctgacatttccagtaggaattatttggacagg
cacccacaatcacatacgatgatgaactggagccagctctcgcagtcattgacaacaggg
tgggaagtggataaatga
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