Panicum hallii (Hall's panicgrass): 112892871
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Entry
112892871 CDS
T07366
Name
(RefSeq) RING-H2 finger protein ATL39-like
KO
K19038
E3 ubiquitin-protein ligase ATL41 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112892871
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112892871
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
112892871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-ANAPC11
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-C3HC4_3
Prok-RING_1
RINGv
zf-RING-like
PHD
zf-RING_6
Tmpp129
Motif
Other DBs
NCBI-GeneID:
112892871
NCBI-ProteinID:
XP_025815759
LinkDB
All DBs
Position
5:complement(58014843..58015328)
Genome browser
AA seq
161 aa
AA seq
DB search
MAPSSESLPGDVIRCRRFTAVLAAGAASFTFCVLFVALFLYLRFLLRRWRARRGRGAASS
SLVPQEQAGPGSPSGGLDAAAIALLPSLPYQRGAGVAEAECAVCLGALDEGQTLRQLPGC
MHVFHLPCVDAWLSSNASCPVCRRRTEPARAEEAAAALGLA
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atggctccgagcagcgagtccctgccgggagacgtcatccggtgccgccgcttcacggcg
gtgctcgcggcaggcgcggcctccttcacgttctgcgtcctcttcgtcgccctcttcctc
tacctgcgcttcctcctgcggcggtggcgcgcgcgccgcgggcgcggagctgcgagcagc
agcctcgtgccgcaggagcaggccggcccgggtagcccctccggcggcctcgacgccgcg
gccatcgcgctgctcccgtccttaccgtaccagcgaggcgccggcgttgccgaggccgag
tgcgcggtctgcctcggcgccctcgacgaggggcagacgttgaggcagctccccgggtgc
atgcacgtgttccacctgccatgcgtggacgcgtggctctcgtcgaacgcgtcgtgcccg
gtctgccgccggaggaccgagccggcgcgcgccgaggaggcggcggctgcactcggtttg
gcgtga
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integrated database retrieval system
