Panicum hallii (Hall's panicgrass): 112892925
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Entry
112892925 CDS
T07366
Name
(RefSeq) protein argonaute 4A-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112892925
03036 Chromosome and associated proteins [BR:
phai03036
]
112892925
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112892925
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112892925
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
112892925
microRNA pathway
RISC loading complex
112892925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
112892925
NCBI-ProteinID:
XP_025815816
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Position
5:51048466..51056016
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AA seq
902 aa
AA seq
DB search
MEYHNGEADDLPPPPPLDASIEPFKAEETKKLLKPKRALVPRKGFGKKGQPIKLITNHFK
VSLKNTEEFFYHYYVNLKYEDDTPVDRKGAGRSVIEKLQQTYATELANKDFAYDGEKSLF
TIGALPQINNEFIVVVEDVSTGKTPVNGSPGNDSPPGSDRKRIRRPYNTKTYKVELSFAA
KIPMSAISHALRGQESEHTQEAIRVIDIILRQHSAKQGCLLVRQSFFHNNPSNFVDLGGG
VMGCRGFHSSFRATQSGLSLNIDVSTTMIVKPGPVLDFLIANQKVDHPNKIDWAKAKRSL
KNLRIKIITTNAENKIVGLSDRPCRETMFTLKRRNDDNGDTEEISVYDHFVKNRGIELRY
SGDFPCINVGKPKRPSYFPIELCALVSLQRYTKSLSTLQRSSLVEKSRQKPQERMSVLSD
VLHRSNYDSEPMLMACGISIAKSFTEVDGRVLQAPKLKAGNGEDIFTRNGRWNFNNKRLI
RASSVEKWAVVNFSARCNVRDLVRDLIKCGGMKGIKVETPFDAFEENPSMRRAPAVRRVE
DMFEQVKTKLPGAPKFLLCVLAERKNSDVYGPWKRKCLAEFGIVTQCVAPTRVNDQYLTN
VLLKINAKLGGLNSILQVESSPAMPLISKVPTMILGMDVSHGSPGQSGVPSIAAVVSSRE
WPLISKYRASVRSQSPKMEMIDSLFKQQGTDDKGLIRECLIDFYTSSGKRKPDQIIIFRD
GVSESQFSQVLNIELDQIIEACKFLDEKWDPKFTLIVAQKNHHTKFFIPGAPDNVPPGTV
VDNKVCHPRNYDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDELQELVHSLSYVYQRSTT
AISVVAPICYAHLAAAQVGQFIKFDEMSETSSSHGEHTSAGSVQVQELPRLHEKVRSSMF
FC
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggagtatcacaatggcgaggctgatgacttgcctcctccacctcctctagatgcgagc
attgaaccttttaaagctgaggaaacaaagaagctgttgaaacctaagagggctctggtc
cctaggaaaggttttggcaaaaaggggcagccaataaagcttataacgaaccacttcaaa
gtttcactgaagaacactgaagaatttttctatcactactatgtgaatttgaaatatgaa
gatgatacacctgttgatcgcaagggagcaggaaggagcgtgattgagaaacttcagcaa
acctatgccactgaacttgcaaataaagattttgcatatgatggtgagaagagcctgttc
acaattggcgctcttcctcaaattaataacgagttcattgttgtggtggaagacgtttca
actggaaagactcctgtaaatggcagccctggcaacgacagtccacctggaagtgacagg
aaaaggatcagaaggccttacaatacaaagacatataaagttgagctgtctttcgcagcg
aaaattcctatgagtgcaatctcacatgcattgagaggtcaggaatcagagcatactcag
gaagccattcgagtgatagatattattctgaggcagcactcagcaaagcagggttgcctc
ttggttcgtcaatcattcttccataacaatccttccaactttgttgaccttggtggtggt
gtaatgggctgtagaggattccattccagtttccgtgccacacagagtggactttcactt
aatattgatgtgtcaacaacaatgatagtaaaaccaggtcctgtacttgattttctgatt
gccaaccagaaggttgaccatccaaacaagattgactgggcaaaggcaaagcgctcattg
aagaacttgaggataaaaataatcacaacgaatgcagaaaacaagattgttggtctgagt
gacaggccatgccgagaaacaatgtttacactaaagcgtagaaatgatgacaatggtgac
actgaagagatcagtgtttatgatcacttcgtaaagaaccgtggcatagagcttagatac
tctggtgactttccttgtatcaatgtgggaaaaccaaagcggccatcttattttcctata
gagctctgtgcacttgtgtctttacaaagatacactaagtcattgagtacacttcagagg
tcttcacttgttgagaagtctaggcagaaaccccaagaaaggatgtctgttctgtctgat
gtactgcaccgcagcaactatgattcagagcctatgctaatggcatgtggcatttcaatt
gctaaaagtttcactgaggtggatggtagggtgctgcaagcccccaagctcaaagcgggc
aatggagaagacatttttacacgcaatgggagatggaacttcaacaataagaggctcatt
agagctagcagtgttgaaaaatgggcagtagtcaatttttctgcacgctgcaatgtcagg
gaccttgtccgagatctcatcaagtgtggcggcatgaagggaattaaagtagagacacct
tttgatgcatttgaagagaatccttccatgaggagggcacctgctgtaagaagggtggag
gacatgtttgaacaagtgaaaacaaagctgccaggagcacccaagtttcttttgtgtgtt
cttgctgagaggaagaattctgatgtttatgggccttggaagaggaaatgccttgctgaa
tttgggatcgttacacagtgcgtggcaccaacaagagttaatgatcagtaccttaccaac
gtcctgctaaagataaatgcaaagttgggtgggttaaattcaattctccaagttgaatca
tcccctgcaatgcctcttatatccaaggtcccaactatgattttgggaatggatgtgtcc
catggttctcctggacaatctggtgtaccttccattgctgctgttgtcagttcgcgcgaa
tggcctcttatctcaaaatatagagcatcagtgcgctctcaatcacctaagatggaaatg
attgattcgttgtttaagcaacagggaacggatgataagggcctgattcgggagtgtcta
attgacttctacaccagttctgggaagagaaagccagatcaaatcattatcttcagggat
ggtgttagtgaaagtcagtttagtcaggtgctgaacatagaattggatcaaataattgag
gcatgcaagtttttggatgaaaaatgggatcccaagttcacattgattgttgcccagaag
aaccaccatacgaaatttttcattcctggagcacctgataatgttcctcctggtactgta
gtcgacaacaaagtctgccatccaaggaactatgacttctacatgtgttcgcatgctgga
atgataggaactacgagacctacacattatcacatcctccatgatgagataggcttcaac
cctgatgagcttcaggagctggtgcactcactttcttatgtgtaccaaaggagtacaaca
gccatatcagttgttgctcctatctgctatgcacatcttgctgctgcccaggttggacaa
tttataaaattcgatgagatgtcggaaacgtcctccagccatggcgagcacacatccgca
ggcagtgtccaggtgcaggagctgccccgtctccacgaaaaggtcaggagctccatgttc
ttctgctga
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