KEGG   Panicum hallii (Hall's panicgrass): 112893020
Entry
112893020         CDS       T07366                                 
Name
(RefSeq) UBP1-associated protein 2A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112893020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phai03019]
    112893020
   03041 Spliceosome [BR:phai03041]
    112893020
Messenger RNA biogenesis [BR:phai03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     112893020
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     112893020
Spliceosome [BR:phai03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    112893020
SSDB
Motif
Pfam: RRM_1 RRM_7 CSTF2_hinge
Other DBs
NCBI-GeneID: 112893020
NCBI-ProteinID: XP_025815943
LinkDB
Position
5:51679004..51682073
AA seq 446 aa
MGKKRKLETKSAAAAKSTPAAAARSATAMAAGLSEVTAPVVAPREEKLSEEAGVKEEVEE
EVEVEEEVEVEEEEEEVEEGESDPASIQSLLDSFPKDQLVELLRDAAVAHSDVLSAVRRV
ADADPAQRKIFVHGLGWDATADTLTEAFGPYGEIEDLRVVTDRNTGKCKGYGFILFRHRS
GARAALREPQKKIGNRNTACQLASVGPVPAGGAANNSAPAPAQLQLPPVSEYTQRKIFVS
NVGADIDPQKLLQFFARYGEIEEGPLGLDKVTGKPKGFALFVYKTIESAKKALEEPHKHF
EGVVLHCQKAIDGPKPNKLAGPGGFYGAGASSGSKGVPGYGSTSHTLPGSVGIGQPMSPL
APSLASLPGGIAAAPGVDPALGQALTALLATQGAGLNLNSILGVGANGSGVPPQGASGAL
SGSSLPGMQGGYMGGYGGSGGYGGAP
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgggcaagaagcggaagctggagaccaaatccgcggcagccgctaagtctaccccggcc
gctgcagccaggtccgccaccgctatggccgccggcctatccgaggtcaccgctcccgtc
gtggcgccgagggaggagaagctgtccgaggaggcaggcgtcaaggaggaagtcgaggag
gaggtggaggtcgaggaggaagtggaggtcgaggaggaggaggaggaggtggaggagggc
gagagcgacccggcctcgatccagtcgctgctggattccttccccaaggaccagctcgtc
gagctgctccgcgacgcggccgtcgcgcacagcgacgtgctaagcgccgtccggcgcgtg
gccgacgccgacccggctcagcggaagatcttcgtccacgggctcggctgggacgccacc
gccgacaccctcaccgaggcgttcggcccctacggcgagatcgaggacctcagggtcgtc
accgaccgcaacaccggcaagtgcaaggggtacggcttcatccttttccgccaccgctcg
ggcgcccgcgccgcactccgtgagccccagaagaagattgggaaccgcaacactgcctgc
cagctcgcctctgtcggccctgtccctgctggtggtgcggccaacaactctgcgccagcc
ccagctcaattgcagctgccaccggtttcagagtacacgcagcgcaagatatttgtcagc
aatgttggtgcagatatcgatccccagaaactgcttcagttctttgcaaggtatggtgag
attgaggagggtccgcttgggcttgacaaggtcactgggaaacccaagggatttgctctt
tttgtctacaaaaccattgagagtgccaagaaggctcttgaggagccgcataagcatttt
gaaggagttgtgctccactgccagaaggcgattgatggaccaaagcccaacaaattggca
ggacctggaggcttctacggtgctggggcttcaagtggcagcaagggggttcctggttat
ggatctactagtcatactctgcccggaagtgttggtattggccagccaatgtcacctttg
gctcccagcttggcttcactgcctggaggtattgctgccgccccaggggtggatcctgct
ctaggacaggccttgacagctttgcttgccacccagggtgctggactgaatttgaatagc
atcctgggagttggtgccaatggctcaggggtgcctcctcagggggcatctggagcactg
agtggtagcagtttgccggggatgcaaggtggttatatgggtggctatggtggttctggt
gggtacgggggtgcaccgtga

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