Panicum hallii (Hall's panicgrass): 112893026
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Entry
112893026 CDS
T07366
Name
(RefSeq) autophagy-related protein 18a
KO
K22991
WD repeat-containing protein 45
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112893026
Membrane trafficking [BR:
phai04131
]
Autophagy
Other autophagy associated proteins
Others
112893026
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_THOC3
Beta-prop_WDR5
BCAS3_WD40
Beta-prop_EML_2
WD40
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
CFAP251_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_EML
WDR55
CPSF_A
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_2nd
Beta-prop_NUP159_NUP214
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
Tricorn_2nd
PEP5_VPS11_N
DUF7099
WD40_Gbeta
Ge1_WD40
NBCH_WD40
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
112893026
NCBI-ProteinID:
XP_025815948
LinkDB
All DBs
Position
5:1878039..1881207
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AA seq
448 aa
AA seq
DB search
MATPAAAPAPPNPNPVPDDPPPPPPQQEEEAPEQEQETSSPPPLAPTTSIERTPSGGEET
ESDDSSSVSSAASSAPAPAAAGGAAGRPFPAAKDLLHISFNQDYGCFAAGTKSGFRIYNC
DPFREIFRRDLAAEGDGSGGGGIGVVEMLFRCNILALVGGGDNPHYPPNKVMIWDDHQSR
CIGELSFRSPVRGVRLRRDRIIVVLENKIFVYNFADLKLVHQIETAPNPKGLCAVSQQPG
SIVLVCPGAQKGQVRVEHYGARKTKFINAHTSRVACFALSQDGRLIATASTKGTLVRIYN
AVEGNLLQEVRRGADRAEIYSLAFSNNLQYLAVSSDKGTIHVFNLKINVGSTANDKPMPA
PESEIPHISPPLSFIKGVLPKYFHSEWSVAQFRLHEGEQYIVAFGHEKNTVAVVGMDGSF
YRCQFDPVNGGEMLQLECYNFLKPSDQQ
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcccgccgccgccccggccccaccaaaccctaaccccgtccccgacgacccg
ccgcctccaccgccgcagcaggaggaggaggcgccggagcaggagcaggagacgtcgtcg
ccgccgccgctcgcccccaccacctcgatcgagcgcaccccgtccggcggcgaggagacc
gagagcgatgactcctcgtccgtctcgtcggcagcctcctccgcccccgcccccgctgcc
gccgggggcgcggccgggaggcccttccccgcggccaaggacctgctccacatctccttc
aaccaggactacggctgcttcgcggcgggcaccaagtcgggcttccgcatctacaactgc
gaccccttccgcgagatcttccgccgcgacctcgccgccgagggcgacggcagcggggga
gggggcatcggcgtcgtcgagatgctcttccgctgcaacatactcgcgctcgtcggcggt
ggcgacaacccccactacccgcccaacaaggtcatgatctgggatgaccaccagagccgc
tgcatcggggagctctccttccgctccccagtccgcggagtccgcctgcgccgcgaccgc
atcatagtggtcctcgagaacaaaattttcgtgtacaacttcgccgaccttaagctcgtg
caccagattgagacggcgcccaaccccaagggtctctgcgcggtgtcgcagcagcctggg
tccatcgtgctagtttgccctggtgcgcaaaaggggcaggtcagggtggaacactatggg
gcaaggaagaccaagtttatcaatgcacacacttcccgtgttgcgtgcttcgcgttgtcg
caggatgggaggctgatcgccactgctagcaccaaaggaacgctagtcagaatctacaat
gctgttgagggcaatcttctgcaggaagtaaggagaggtgcagacagagcagaaatatat
agcttggctttctcaaataatttgcagtatttggctgtatccagtgataaaggaacaatt
cacgtgttcaatctaaagataaatgtgggatcgactgcaaatgataagcctatgcctgct
ccagaatccgaaattccccatataagtcctcctctttccttcatcaagggtgtgttgcca
aaatatttccactctgagtggtcagttgctcaattcaggctccatgagggtgagcagtat
attgttgcatttggacacgagaagaataccgtggcagttgttggtatggatggaagcttc
tacagatgccagtttgaccctgttaatggaggagaaatgttgcagctggagtgctacaat
ttcctaaaaccatcggatcaacagtag
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integrated database retrieval system