KEGG   Panicum hallii (Hall's panicgrass): 112893026
Entry
112893026         CDS       T07366                                 
Name
(RefSeq) autophagy-related protein 18a
  KO
K22991  WD repeat-containing protein 45
Organism
phai  Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:phai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:phai04131]
    112893026
Membrane trafficking [BR:phai04131]
 Autophagy
  Other autophagy associated proteins
   Others
    112893026
SSDB
Motif
Pfam: PROPPIN Beta-prop_THOC3 Beta-prop_WDR5 BCAS3_WD40 Beta-prop_EML_2 WD40 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st CFAP251_N Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_EML WDR55 CPSF_A Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_WDR36-Utp21_2nd Beta-prop_NUP159_NUP214 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st Beta-prop_VPS8 Tricorn_2nd PEP5_VPS11_N DUF7099 WD40_Gbeta Ge1_WD40 NBCH_WD40 Beta-prop_IFT80_2nd
Other DBs
NCBI-GeneID: 112893026
NCBI-ProteinID: XP_025815948
LinkDB
Position
5:1878039..1881207
AA seq 448 aa
MATPAAAPAPPNPNPVPDDPPPPPPQQEEEAPEQEQETSSPPPLAPTTSIERTPSGGEET
ESDDSSSVSSAASSAPAPAAAGGAAGRPFPAAKDLLHISFNQDYGCFAAGTKSGFRIYNC
DPFREIFRRDLAAEGDGSGGGGIGVVEMLFRCNILALVGGGDNPHYPPNKVMIWDDHQSR
CIGELSFRSPVRGVRLRRDRIIVVLENKIFVYNFADLKLVHQIETAPNPKGLCAVSQQPG
SIVLVCPGAQKGQVRVEHYGARKTKFINAHTSRVACFALSQDGRLIATASTKGTLVRIYN
AVEGNLLQEVRRGADRAEIYSLAFSNNLQYLAVSSDKGTIHVFNLKINVGSTANDKPMPA
PESEIPHISPPLSFIKGVLPKYFHSEWSVAQFRLHEGEQYIVAFGHEKNTVAVVGMDGSF
YRCQFDPVNGGEMLQLECYNFLKPSDQQ
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggcgacgcccgccgccgccccggccccaccaaaccctaaccccgtccccgacgacccg
ccgcctccaccgccgcagcaggaggaggaggcgccggagcaggagcaggagacgtcgtcg
ccgccgccgctcgcccccaccacctcgatcgagcgcaccccgtccggcggcgaggagacc
gagagcgatgactcctcgtccgtctcgtcggcagcctcctccgcccccgcccccgctgcc
gccgggggcgcggccgggaggcccttccccgcggccaaggacctgctccacatctccttc
aaccaggactacggctgcttcgcggcgggcaccaagtcgggcttccgcatctacaactgc
gaccccttccgcgagatcttccgccgcgacctcgccgccgagggcgacggcagcggggga
gggggcatcggcgtcgtcgagatgctcttccgctgcaacatactcgcgctcgtcggcggt
ggcgacaacccccactacccgcccaacaaggtcatgatctgggatgaccaccagagccgc
tgcatcggggagctctccttccgctccccagtccgcggagtccgcctgcgccgcgaccgc
atcatagtggtcctcgagaacaaaattttcgtgtacaacttcgccgaccttaagctcgtg
caccagattgagacggcgcccaaccccaagggtctctgcgcggtgtcgcagcagcctggg
tccatcgtgctagtttgccctggtgcgcaaaaggggcaggtcagggtggaacactatggg
gcaaggaagaccaagtttatcaatgcacacacttcccgtgttgcgtgcttcgcgttgtcg
caggatgggaggctgatcgccactgctagcaccaaaggaacgctagtcagaatctacaat
gctgttgagggcaatcttctgcaggaagtaaggagaggtgcagacagagcagaaatatat
agcttggctttctcaaataatttgcagtatttggctgtatccagtgataaaggaacaatt
cacgtgttcaatctaaagataaatgtgggatcgactgcaaatgataagcctatgcctgct
ccagaatccgaaattccccatataagtcctcctctttccttcatcaagggtgtgttgcca
aaatatttccactctgagtggtcagttgctcaattcaggctccatgagggtgagcagtat
attgttgcatttggacacgagaagaataccgtggcagttgttggtatggatggaagcttc
tacagatgccagtttgaccctgttaatggaggagaaatgttgcagctggagtgctacaat
ttcctaaaaccatcggatcaacagtag

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