Panicum hallii (Hall's panicgrass): 112893051
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Entry
112893051 CDS
T07366
Name
(RefSeq) ubiquitin-like modifier-activating enzyme atg7
KO
K08337
ubiquitin-like modifier-activating enzyme ATG7
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
112893051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112893051
04121 Ubiquitin system [BR:
phai04121
]
112893051
03029 Mitochondrial biogenesis [BR:
phai03029
]
112893051
Membrane trafficking [BR:
phai04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
112893051
Atg8 conjugation proteins
112893051
Ubiquitin system [BR:
phai04121
]
Ubiquitin-activating enzymes (E1)
UBL-activating enzymes
112893051
Mitochondrial biogenesis [BR:
phai03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
112893051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG7_N
ThiF
Shikimate_DH
Pyr_redox_2
Pyr_redox
ELFV_dehydrog
2-Hacid_dh_C
Stu2_CTS
Motif
Other DBs
NCBI-GeneID:
112893051
NCBI-ProteinID:
XP_025815990
LinkDB
All DBs
Position
5:15518325..15525727
Genome browser
AA seq
1018 aa
AA seq
DB search
MAGAGAAGFPRLLKAQALQCLADEGFWDALRRHKLDILGTDDSPIPITGYYTPRQFRPMA
SFFNLRPGSLNNSSGDRNGCPVPGTLINTNNMRGFQDLDRELLLKAEAKKILHDIISGNV
EENPALLLRFLATSFADLKNWKVYYNVAFPSLVLNSRMTLLSLHCASELLSKEEAASLYE
ALQEWRASSETTVVPFFLVGISSDSSASVRPLKDWKTCQGNYQKLLFGFYDHGCLSDCPG
WAIRNYITFLTIRWKIEKAQFFCYREYRGNPDLEQSFIGEASFPSPHGWDNPDHVPDAIG
WEGLKPGKGTKEMKPKEIDLQSMSPASQDEEKQLMHLKLMGWRHFPVNIDKLSQVRVLVL
GAGTLGCEVARLLMTWGVRKLTVVDSGSVATSDLIKQSLYIDKDCGVPRVTAIVQHLKAR
CPAVEVEGIQMEIPVPGHPDSPSKMASVLDDCKHLQTLVAANDAVFLLTDTWESRWLPTV
LCASENKIAITAVLGCDSYLVMRHGAGPGTSEVTNELAAQIEKMSTEDALGNQRLGCCFC
NDAVSLFNPIPNGTLPGLTSVASGKAVELFARMLHHPDEIHAPGDIAGMETEHQLGLLPH
QLRGSLPKCVLSMELGNSSRNCTACSVAVLSEYRRRGLDFVMQAINYPTYLKDLTGISDS
KRPDSCPKMLASISVNSDKISDVRCLLLGAGTLGCDVARILMDCGVRKLTVVDSGRVVVS
NLARQSLYTSDDRGAPKATAMVKHLVERCPSVDAQGIQMEIPMPGHPVSPGEAAGVLQDC
KRLKELVASHDAIFLLTDTRESRWLPTLLCTNENKIAITAALGYDSYLVMRHGAGPGRSC
EASNVTAATDKLSTKDSLGRQRLGCYFCNDVVAPVDSVSNRTLDQQCTVTRPGLASIASG
CAADLFTRMLHHPDGIHAPGDIAGASSGHPLGLLPHQMRGSLSQYNLLTLLGYSSSNCTA
CSNVVLSEYRRRGMDFVMQVINEPTYLEDLTGLTDLMKSAACSQVEWVETDEDDFVEI
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgccggtgcggcggggttcccgcggctactgaaggctcaggccctccagtgc
ttagcggatgaggggttctgggacgcgctccgccgccacaagctcgacatcctcggcacc
gacgactcccccatcccaatcaccggttactatactccacgccagtttcgcccgatggcg
agcttcttcaacctacgtccgggatcattgaacaattcgtctggtgataggaacggttgt
ccagttccagggaccctcataaacactaataacatgaggggattccaagacctagatagg
gaacttcttctgaaagcggaagcaaagaagatcttgcatgacattatatctggtaatgta
gaagagaatcccgctctgctacttaggttccttgcgacatcatttgccgatctgaagaat
tggaaggtctattacaatgttgcattcccctcgttggttttgaactctagaatgaccctg
ctcagtctgcactgcgcctcagaactgctcagtaaagaagaggcagcatccttgtatgaa
gcattgcaagagtggcgtgcttctagtgaaacaacagttgtaccattctttctggttggt
atatcctcggactcctctgcctctgtaagaccacttaaggactggaaaacttgccagggg
aactatcaaaagctgctgtttggattttatgatcatggatgtctctcagattgccctggc
tgggctattagaaactacattacattcctgactatccggtggaagattgagaaggctcag
ttcttctgctaccgtgaatatcgaggaaaccctgatctagaacaatccttcattggcgaa
gcatcatttccatcacctcatgggtgggataatcctgatcatgtacctgatgctattgga
tgggaaggattaaagccaggaaagggaacaaaagaaatgaagccaaaagaaatagatctt
caatcaatgagtccagcaagtcaggatgaagaaaaacaactgatgcacttaaagcttatg
gggtggcgccactttcctgtgaatatagacaagttatctcaggttcgggttcttgtcttg
ggtgctggaactcttggatgtgaagttgctcgcctacttatgacctggggtgtacggaaa
ttaactgtggttgacagtggtagtgttgccacgtctgaccttatcaagcaatcactctac
atagataaggactgtggagttccaagagtaactgcaatagttcaacatctaaaagcaaga
tgtcctgcagtggaggttgaaggcatccaaatggaaataccggtgcctgggcatcctgat
tctcccagcaaaatggcaagtgtgcttgatgactgcaagcatctgcagacattagtggct
gccaatgatgcagttttcttgttaactgacacatgggagagcaggtggcttccaactgtt
ctctgtgcaagcgaaaacaagattgctattactgcagtattaggatgtgacagttacctt
gtcatgcgacatggtgctggtccaggaacaagtgaggttacaaatgaattggctgctcag
atagaaaaaatgtctacagaagatgctcttggcaatcagagattgggctgttgtttctgc
aatgatgctgtttccctttttaatccaattcctaatggaacactacctggacttacctca
gttgcatctggcaaagcagttgagctctttgctaggatgttacatcatcctgatgagata
catgctccaggtgatattgctggtatggaaacagaacatcagcttggtctattaccacat
cagctacgaggatcactcccaaagtgtgttttatctatggaactaggcaattcctccaga
aactgtactgcatgttcagttgcagtgttgtcagagtacagaagaagaggattggatttc
gtcatgcaagctattaactatccaacatatctgaaggatcttacaggcatttctgattca
aagaggccagattcttgtcctaagatgctggccagcatatctgtaaattcagacaagatt
tctgatgtccgatgtctacttttgggtgctggaactcttggatgtgatgttgctcgcatt
cttatggactgtggtgtacggaagctaacagtggttgatagtggtcgtgtagttgtgtca
aatttggcaagacaatcactctacacttctgatgaccgtggtgccccaaaagcaactgca
atggttaagcatctagtggagaggtgtccttcggtggatgcacaaggcattcagatggaa
atacctatgccagggcatcctgtgtctcctggtgaagcagctggcgtgcttcaagattgc
aagcgccttaaggaattagtagcttcccatgatgctatcttcttgttgactgacacaagg
gaaagtaggtggcttccaactctcctctgcactaatgaaaacaagattgctattactgca
gcattagggtatgatagttaccttgtcatgcgacatggggctggtcctggcaggagctgt
gaagcttcaaatgtgactgctgccacggataagctgtccacaaaggattcccttggacgt
caaagactggggtgttatttctgcaatgacgtcgttgctcctgttgattctgtctccaat
cggacactggatcaacaatgtacagtgacacgacctgggctggcctctattgcatctgga
tgtgctgcagacctcttcacaagaatgttacatcatcctgatgggatacatgctccagga
gatattgctggtgcaagcagtggccatccgcttggtctattacctcaccagatgcgtgga
tcactctcacagtacaacttattaaccctcttgggctattcctcgagcaattgcacagcg
tgttccaatgtggtattgtctgaatatcggaggagaggaatggatttcgtgatgcaagtg
atcaacgaaccaacgtatttggaagacctcaccggccttacggacttgatgaaatccgca
gcttgctctcaggtcgagtgggtagaaactgatgaagacgattttgtcgagatctga
DBGET
integrated database retrieval system
