Panicum hallii (Hall's panicgrass): 112893201
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Entry
112893201 CDS
T07366
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112893201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112893201
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112893201
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112893201
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
112893201
NCBI-ProteinID:
XP_025816186
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Position
5:complement(59166587..59169505)
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AA seq
402 aa
AA seq
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MGVNGGHLPHREQEQPSPIAHPPPNRKWSGYSSPPAPAIRARRSLPLPPQSAGPPRRPRL
PSLRPPSPCRSPGTAHAPVPVAEAGRRAAMDVGSVDCVSLPDAAAPAAVDDAGRGLGTLL
AAARAYPKGASAGGVHELLECPVCTNYMFPPIHQCQNGHTLCSTCKARVHNRCPTCRQEL
GDIRCLALEKVAESLELPCKYYSLGCQEIFPYYSKIKHEAQCNFRPYNCPYAGSECAAAG
DIPYLVSHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQ
LGMAPVYMAFLRFMGDENEAKNYSYSLEVGANGRKMIWEGTPRSVRDSHRKVRDSHDGLI
IQRNMALFFSGGDRKELKVRITGRIWKEQQTPDGACIPNLCS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtcaacggcggtcatctccctcaccgcgagcaggagcagccatcccccattgcc
catccaccaccgaatagaaaatggtccggctattctagcccgccggcccccgcaatccgc
gcgcggcgctcccttcctctcccgccacaaagcgccggacccccgcgccgcccccgcctc
ccgtccctccgtccgcccagcccctgccggagcccagggaccgctcacgcgcctgtcccc
gtggcggaggcgggccggcgggcggccatggacgtgggcagcgtcgactgcgtctcgctg
cccgacgccgccgcccccgcggccgtggacgatgccggccgcggcctcggcacgctcctc
gccgccgccagggcctaccccaagggcgccagcgccggcggcgtgcacgagctgctcgag
tgccccgtctgcaccaactacatgttcccgccgatccaccagtgccaaaatgggcatacg
ttgtgttccacatgcaaggctagagtgcacaatcgttgccctacgtgcagacaggagctt
ggcgatatcaggtgtttggcactggagaaagtagccgagtcgcttgagcttccctgcaag
tactactccttgggatgccaggaaatctttccatactacagcaagataaaacatgaagca
caatgcaacttcagaccgtataattgcccctatgctgggtctgagtgtgccgcggctggc
gacatcccatatcttgtttcccatttgagggatgatcacaaagttgatatgcatagcggt
tgcacattcaaccacagatacgtgaaatcaaacccacgagaagtggaaaacgccacctgg
atgctgacagtgtttcactgcttcgggcagtacttctgcctgcactttgaggccttccag
cttgggatggcaccagtatacatggccttccttcgtttcatgggagacgagaacgaggcg
aagaactacagctacagccttgaggtgggcgccaatggcaggaagatgatttgggagggc
accccgaggagcgtccgcgacagccaccggaaggtgcgggacagccatgacggcctcatc
atccagaggaacatggcgctgttcttctcaggtggtgacaggaaggagctgaaggtcagg
atcaccggtcggatctggaaagagcagcagaccccggatggtgcctgtatacccaatctg
tgtagctaa
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