Panicum hallii (Hall's panicgrass): 112893328
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Entry
112893328 CDS
T07366
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phai03041
]
112893328
Spliceosome [BR:
phai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112893328
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
112893328
NCBI-ProteinID:
XP_025816375
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All DBs
Position
5:15158466..15163651
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AA seq
558 aa
AA seq
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MASGGQPQFRYTQPPSKVLHLRNLPWDCTPEELVELGTPFGKVVNTKCGVGANRNQAFIE
FADQNQAIAMISYYASSAEPAQVRGKNVYLQYSNRQEIVNTKTTGEGSGNVLLVGMEGVA
PDSVSIDVLHVVFSAFGFVHKIATFEKASGYQALIQFSDAETATSAKAALDGRCIPSYLL
PELDGACTLRISYSAHSVLNVKYQSHRSRDFTNPYLPFLDSAKDGSGADGKKQEPESNIL
LASIENMQYVVTIDVLHEVFSAFGFVQKIAIFEKNGFQALIQYPDIQTAVAAKEALEGHS
IYEGGYCKLHLAFSRHTELNVKVNNERGRDYTKGNITASSNQPSILGPQPVPNVGAAIPQ
ANNSVPSAATSAVMPPGVPSPAMPGEPSVALSSHPSSEPHSQTPVAPPGGPPQYSSQAIL
PGPPQQFPGYGSAQAPMLQPSGQGSQQMSNHVNYQLPPGSAQFMQYLGNGSHLVPNSHGP
QAVPFPGLGGQQLPPGPQMMQAPGYGGLPFSQGPRQPMTQFPMYGNQQFPPGMEPQMMPF
SELGGQQLPFAPQGPYRR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcttccggtgggcagccgcagttccggtacacgcagccgccgtcgaaggtgctccac
ctgcggaacctgccgtgggactgcaccccggaggagttggtcgagctggggacccccttc
ggcaaggtcgtcaacaccaagtgcggcgtcggcgccaaccgcaaccaggcattcatcgaa
ttcgctgaccaaaatcaagcgattgccatgatatcatattatgcgtcgtcagcagagcca
gcacaggtaagagggaaaaatgtgtatcttcagtactccaatagacaggagattgtcaac
accaagactaccggggaaggttcaggcaacgttttgcttgtggggatggagggtgtcgcg
ccagattctgtcagcatcgatgttctacacgtggtattttctgcttttggatttgttcac
aagattgctacctttgagaaggcatctggttatcaggcgttaattcagttttctgatgct
gaaaccgcaacatccgcaaaagctgcactggatggtagatgcattcctagctatttgcta
ccagaactggatggggcctgcactttgagaataagctattcagcacacagtgttctcaat
gtcaagtatcagagccacagaagtagggactttactaacccttaccttccttttctggat
tctgctaaagatggatctggagcggatggtaaaaagcaggaaccagagagcaatatactt
cttgcatccattgagaacatgcagtatgttgttacaatagacgtgcttcatgaggtcttt
tctgcttttggatttgtacaaaagatagcaatttttgagaagaatggctttcaagcattg
atccagtatccagacattcaaactgcagttgcagcaaaagaagcgttagaagggcacagc
atctatgaaggtggatactgcaagcttcacctcgcattttcacgacatactgagcttaat
gttaaggttaacaacgagcgaggtagagattatacaaaggggaacatcactgcaagcagt
aatcaaccttccattcttggtcctcagccagtaccaaatgttggtgccgccattccacag
gcaaacaatagtgttccttctgcagccaccagtgcagtaatgccaccaggggtgcccagt
ccagcaatgcctggagaaccatcagttgctctatcttcccatccttcaagtgagccacac
tcgcaaactcctgttgcgcccccaggtggacctccacagtactctagccaggcaatcctc
ccaggcccccctcaacagttcccaggttatggctcagctcaagctccaatgctgcagcct
tcaggtcagggaagtcaacagatgtccaaccatgtaaactatcagctacctccaggttca
gcccagttcatgcagtatcttggcaatggaagccatctggttccaaactcacatggccca
caagcagtgcctttccctggcctcggtgggcagcagctacctccaggtccccagatgatg
caagctccaggttatggaggtctgccattttcacaaggtccacggcaaccgatgacacag
tttccaatgtacggcaaccagcagttccctccgggtatggagccccagatgatgcccttc
tctgagctgggaggtcaacagcttccatttgctccgcagggtccctatcgtcgttag
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