Panicum hallii (Hall's panicgrass): 112893444
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Entry
112893444 CDS
T07366
Name
(RefSeq) light-mediated development protein DET1 isoform X1
KO
K10571
de-etiolated-1
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112893444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112893444
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
112893444
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Det1
DUF1687
Motif
Other DBs
NCBI-GeneID:
112893444
NCBI-ProteinID:
XP_025816559
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All DBs
Position
5:34846266..34854053
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AA seq
511 aa
AA seq
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MVRFFRSGNVASRVFDRQLLSPRPGAAVNTSRQFYENLVPSYTIYDIDCPDYSFRKFTDD
GKYLVAFSRNHQDLIVYRPIWLTYSCTEECDSHDLPPKAKKFDSFFKQLYSIPLASSNEY
ICKDFFLYMECHQFGLFATSTAQSNDSTATEGAIHGVPSIEKITFYLVRLEDGVILDEKA
FCNDFINLAHSIGAYLYEDLLCIVSLRYQTIHILQIRDSGNLVEVRRIGAFCREDDELFL
HSHVQSGYGGSFLPGIKQRLLSYIFRKTWNEVPDQTLRVQHLKKKFYFHFQDYVDLIIWK
VQFLDRHHLFIKFGSVDGGVSRSTDQNLAFFAVYNMETTDIVSLYQNSSEELYSLFEQFY
DHFHANPQDSSHGKFISSHSNDIHALDQLRTIKNKASSSSQFVKKMMASLPYTCQSQSPS
PYFDLSLFRYDEKLISAIDRHRHCTEHPIKFISVRSPNVVKFKIKPGLDSGASDSRAKRI
SSFLFHPFFPLVLSIQQTYMQPTVVNIHFRR
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgcttcttccgcagcgggaacgtcgcctccagggtcttcgaccgccagctcctc
tccccgcgccccggcgctgcggttaacactagtagacagttctatgagaatttggttcca
agctacacgatatatgacatagattgcccagactattcatttcgcaagttcactgatgat
gggaagtatcttgtggcttttagccgaaaccaccaagatttgattgtataccgccccatc
tggttgacatattcatgcactgaagaatgtgattctcatgatcttccaccaaaggcaaag
aagtttgatagcttctttaagcagctctactcaattccacttgcatccagcaatgaatac
atttgcaaggactttttcctgtacatggaatgccatcaatttggcttatttgcaacatca
actgcacaaagtaatgattcaactgccactgagggtgcaatacatggcgtgccatcaatt
gagaaaataactttctatcttgtgcggctagaagatggcgtcatactggatgaaaaggct
ttctgcaatgattttatcaatctggcacatagtattggtgcttacttgtatgaggacctg
ctttgtattgtttctctgagatatcaaacaatacatatcctacagatccgagattcaggc
aaccttgttgaggtacgcagaattggcgctttctgccgggaagatgatgagctatttctt
cactcacatgttcagtctggttatgggggttcttttcttcctggcatcaagcaacggttg
ttgtcgtatatttttcgcaagacatggaacgaagttccagatcagactttgagggtccag
catctcaagaagaagttctattttcacttccaagactatgttgatcttatcatatggaag
gtacagtttttggatcgccatcacctatttatcaagttcggtagtgtggatggaggggtt
tctcgaagtactgatcaaaacttagcattctttgccgtgtataacatggagacaactgat
atcgtttcgctttaccagaattcatcggaggagctctattccttgtttgaacaattttat
gaccattttcatgccaatccacaagattcatcgcatggaaaatttatctcgtcgcactcc
aatgatattcatgctcttgatcaacttcgcacaataaaaaataaagcaagcagctcctca
cagtttgtgaaaaagatgatggcatcattgccttacacgtgccaatcacagagtccttcg
ccatactttgatctatccctttttaggtatgatgagaagctgatttcagcaattgatcgg
catcggcattgcacagagcatccaataaaatttatatcagtgaggtcaccaaatgttgtc
aaatttaagatcaagccaggtttggattctggtgcttctgacagcagagcgaaaagaatc
tcatccttcttgtttcacccatttttcccacttgtactttcaattcagcagacttatatg
cagccaactgttgtcaatatccatttcaggagatag
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