Panicum hallii (Hall's panicgrass): 112893644
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Entry
112893644 CDS
T07366
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03082
ATP-dependent chromatin remodeling
phai03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112893644
03083 Polycomb repressive complex
112893644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phai03036
]
112893644
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
112893644
Histone modification proteins
HAT complexes
HATB complex
112893644
HDAC complexes
Sin3A-HDAC complex
112893644
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
112893644
PRC2.2
112893644
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
112893644
Heterochromatin formation proteins
Other heterochromatin formation proteins
112893644
Chromatin remodeling factors
NuRD complex
112893644
NuRF complex
112893644
NuRF complex (fruit fly)
112893644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
CAF1C_H4-bd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
EIF3I
WDR55
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
eIF2A
Beta-prop_DCAF12
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
WD40_RFWD3
ANAPC4_WD40
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
112893644
NCBI-ProteinID:
XP_025816873
LinkDB
All DBs
Position
5:complement(11199094..11207814)
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AA seq
453 aa
AA seq
DB search
MKERSGSRAAVDERYAQWKSLIPVLYDWFANHNLVWPSLSCRWGPQFEKATYKNRQRLYL
SEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIVHPGEVNRIREL
PQNSKIIATHTDSPDVLIWDVEAQPNRHAVLGATESRPDLILTGHQENAEFALAMCPAEP
YVLSGGKDKSVVLWSIQDHISALGDSSSSPGASGSKQSGKTANEKESPKVDPRGIFHGHD
STVEDVQFCPSSAQEFCSVGDDACLILWDARTGTSPAVKVEKAHSGDVHCVDWNPLDVNY
ILTGSADNSVRMWDRRNLGFGGAGSPIHKFEGHKAAVLCVQWSPDRASVFGSSAEDGFLN
VWDHEKVGKKKNSNVPAGLFFQHAGHRDKIVDFHWNSSDPWTIVSVSDDGESTGGGGTLQ
IWRMSDLIYRPEEEVLQELENFKAHLASCTPRN
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagaggagcggatccagggcggcggtggatgagcgctacgcgcagtggaagtcg
ctcatcccggtgctctacgactggttcgccaaccacaacctcgtctggccgtcgctctcc
tgccggtggggcccgcaatttgagaaagctacctacaagaatcgccagcgcctttaccta
tctgagcagacggatgggagtgtgcctaacactctggttattgcgaactgtgaagttgtc
aaacccagggttgcagctgctgaacatatctcccagttcaatgaggaagcacgatcgcct
tttgtgaagaagtataagactatagttcatcctggtgaggttaacagaatcagggagctt
ccacagaacagtaagatcatagccactcacaccgacagtccagatgtgcttatttgggat
gttgaagcccaaccaaatagacatgctgtcctaggagcaactgaatctcgccctgatctg
atattaacaggacatcaggaaaatgctgaattcgcgcttgccatgtgtccagcagaacca
tatgtactgtcaggaggaaaggacaaatctgttgtcttgtggagcatccaagaccacata
tctgcccttggggattcctcatcttctcccggagcatctggcagcaagcagtctggcaaa
actgcgaatgaaaaggagagtcccaaagttgatcctcggggtatattccatggacatgac
agcactgttgaagatgttcagttctgcccttccagtgcacaggaattctgtagtgtgggt
gatgatgcttgtcttattctctgggatgcccgtactggtactagcccggctgttaaggtt
gagaaagctcacagtggggatgttcattgtgttgattggaatccgcttgatgttaactat
atcttaactggttctgctgataactctgtccgtatgtgggatcgtcgcaatttgggtttt
ggaggagctggttctccgattcacaaatttgagggccataaagctgctgttctttgtgtc
cagtggtcacctgacagagcatctgttttcggaagttctgcggaagacggtttcttaaat
gtgtgggatcatgagaaggttgggaagaagaaaaattctaacgtaccagcggggcttttc
tttcaacatgctggtcacagggataagattgtagacttccactggaattcatcggatcct
tggacgatcgtcagtgtctcagatgatggtgagagcaccggtggaggtggaacactgcag
atatggcgcatgagtgatttgatctaccgcccagaggaggaagttctccaagaactggag
aatttcaaggctcacttggccagctgcactccgaggaactga
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