Panicum hallii (Hall's panicgrass): 112893687
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Entry
112893687 CDS
T07366
Name
(RefSeq) AMSH-like ubiquitin thioesterase 3
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112893687
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phai01002
]
112893687
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112893687
04121 Ubiquitin system [BR:
phai04121
]
112893687
Enzymes [BR:
phai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112893687
Peptidases and inhibitors [BR:
phai01002
]
Metallo peptidases
Family M67
112893687
Membrane trafficking [BR:
phai04131
]
Endosome - Lysosome transport
Others
Others
112893687
Ubiquitin system [BR:
phai04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
112893687
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
112893687
NCBI-ProteinID:
XP_025816930
LinkDB
All DBs
Position
5:33717756..33726167
Genome browser
AA seq
515 aa
AA seq
DB search
MATVPPRWARGDVSIESLARPVAVDHRITIQYYFRIADNLLRQADVYREEKNLLDLYIIL
LRYSSLLLETIPKHHDYIAFKAREKEFLKKGPHNSKKLRNVLNELESLKPVVQQQFANRN
SGGAEEPNGVPGTYAASSGMEQYIPSPYMPKSLAGSPIGLQQKSFSSSNHQAASVQNIQP
ERQLIKPYSTLPYPKEETLSRHSVLGPNGLHGQWAGPVTGIRIEYPCNPELTQTDISSLV
PSILNQDSLHGPITVSQDKNDDMLSVLSLDDGRWSLPVEEPASVSPGLEAEFSQLNIRQS
SPPPVLAQVHSQRGPIPPSRVADPRPGLATSDTGRYQNLHVPVALMECFLRVAEANTEKN
LETCGILAGTLKKRTFYVTTLIIPKQKSTSDSCQATNEEEIFEVQDKGSLLSLGWIHTHP
TQTCFLSSIDLHNHYAYQIMLPEAIAIVMAPTDTTRKHGIFHLTDPCGMGVIHDCDATGF
HPHEEPLDGTPIYEHCSHVYMNPNVKFEMVDLRAA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggccacggtacctcctcgctgggctaggggagacgtaagtatcgagtccctggcgcgg
ccggtcgctgtcgaccaccgcatcaccatccagtactacttccgcatcgccgacaacctc
cttcgccaggctgatgtgtatcgagaggagaagaaccttctggacctgtacattatcctc
ctgagatattcgagcttgttgcttgagacgatacccaagcatcacgattacattgcattt
aaggcgagagaaaaggaattcctgaagaaaggcccccacaactctaagaaacttcgtaat
gttctcaatgagctagaatccctgaagccagttgtgcagcaacaatttgccaaccgtaat
agcggtggtgcagaggaacctaatggtgtacctggaacctatgctgcaagcagtgggatg
gagcagtatatcccaagcccgtatatgccaaagtcattggctggaagccctattggacta
cagcagaaatcgttctctagttcaaaccatcaagcagcatcggtgcagaatattcaacct
gagagacaactaatcaaaccatattctactttgccttatccaaaagaggaaacactatca
agacactcggtactaggaccaaatgggcttcatggccaatgggcagggcctgttactggt
atcaggattgagtatccatgtaatcctgagttgacccaaactgatatctcgagtttagta
ccatcgatcttgaaccaggacagcttgcatggtcccattacagtatcgcaggacaaaaat
gatgatatgctgtctgttctctcacttgatgatggaagatggtctttaccagtagaagaa
ccagcctcagtatctccgggtttggaagcagagttttcccagctgaatataagacaatct
tctccccctcctgtcctagcacaggtgcattctcagcgtggaccaattcctccatcaaga
gttgctgatccaagaccaggacttgctacctctgacactggacgctatcagaatttgcat
gtgccagtggcattaatggagtgcttcctgagggttgccgaggcaaataccgaaaaaaat
ttggaaacctgtgggattcttgcgggtaccctgaaaaaacgaactttctatgtgacgacg
ctgataattcctaaacagaaatcaacatctgattcatgtcaagctacaaatgaagaagaa
atttttgaagtccaggacaagggctcacttttatctcttggttggattcatacacatcca
acacagacctgcttcctatcttccattgatcttcataatcattatgcgtatcagatcatg
ctacctgaagctattgccattgttatggcaccaactgacacaacaagaaagcatggcata
tttcatctcacggatccatgtggcatgggtgtgatccatgattgtgatgctactggattc
catccccatgaggagccccttgatggcacgccaatctacgagcattgctcccatgtgtac
atgaacccgaacgtgaagtttgagatggttgacctacgtgcagcgtga
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