Panicum hallii (Hall's panicgrass): 112893695
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Entry
112893695 CDS
T07366
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase, chloroplastic-like
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
112893695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phai03400
]
112893695
Enzymes [BR:
phai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
112893695
DNA repair and recombination proteins [BR:
phai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
112893695
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
COMM_domain
Motif
Other DBs
NCBI-GeneID:
112893695
NCBI-ProteinID:
XP_025816940
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Position
5:complement(7419239..7423417)
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AA seq
307 aa
AA seq
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MSKASQRGYHARSNEPWTRLSHRERKPGWFAYNPRTMRPPPLSSDTNFMKILSWNVNGLQ
TAVELGFSADQLASRENFDVLCLQETHLQEHNVNVFKNLIQIQDFDNSYWSCSVTKLNYS
GTAVISRVKPISVQYGLGIPDHDHEGRVITLEFDDFYLVNAYVPNSGRGLQRLNYRVNDW
DLCFSDFIKKLECSKPVIVAGDLNCARQSIDIHNPQAKTEAAGFTIEERESFEENFSSKG
LIDTFRKQHPNAVAYTFWGENQRISNKGWRLDYFLASESIADKVHDSYILPDVSFSDHSP
IGLVLKL
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggcttctcagcgtggatatcatgcccggagcaatgagccctggactcgcctt
tcccatagagagaggaaaccgggatggtttgcgtataatccaaggaccatgaggcctcca
ccacttagcagtgataccaattttatgaagattctgtcctggaatgttaatggactgcaa
actgctgtagagctaggattttctgctgatcaactggctagtagggagaactttgacgtt
ctatgtcttcaggagacacacttgcaggagcacaatgtcaacgtctttaagaatctgata
caaatacaagactttgataacagctattggtcatgcagtgtcacaaagcttaattactca
ggaactgcagtgatttcacgggtaaaaccaatctctgtccaatatggacttggcatacca
gaccatgatcatgaaggcagggttattactttggagtttgatgatttttacttggtcaat
gcttacgtgccaaattctggccgtggtttacagagattgaattacagggttaatgattgg
gatttatgcttcagtgactttataaagaaactggaatgttccaaaccagtaattgttgct
ggtgatctcaactgtgctcgccaaagtattgacattcacaatcctcaagcaaaaactgag
gctgcaggtttcacaattgaagagagggagtcatttgaggagaacttttctagcaaaggc
cttattgatactttccggaaacaacacccaaatgctgtggcctacaccttctggggtgaa
aaccagcgcattagcaacaaaggctggagattggattactttcttgcgtcagaatctatt
gctgacaaggtccatgattcgtacattttaccagatgtatcgttcagcgatcatagtcca
attggccttgtgctgaagctgtag
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