KEGG   Panicum hallii (Hall's panicgrass): 112893797
Entry
112893797         CDS       T07366                                 
Name
(RefSeq) uncharacterized protein LOC112893797
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    112893797
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:phai04121]
    112893797
Enzymes [BR:phai01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112893797
Ubiquitin system [BR:phai04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    112893797
SSDB
Motif
Pfam: zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-RING_2 RING_XB3-XBAT31 Prok-RING_4 zf-C3HC4_4 zf-ANAPC11 zf-rbx1 Baculo_IE-1 zf-RING_6
Other DBs
NCBI-GeneID: 112893797
NCBI-ProteinID: XP_025817079
LinkDB
Position
5:6346228..6348565
AA seq 580 aa
MEADEAAGSSRRMDLNLYLGLPRAPRPRRSDLGSDLALSTPMPSSPSSSAASVDAPPPPP
EALHPPYSPSRADLSPPPPEVYSPYNPEDSPVPDAHLYMPPPETLIPGLQNMPPPEPLIP
GLRDELGYAFQPPPPPPLVRASELLGWEDRPSSSTASSSFFPESAAQYRRLLEQTGSRWL
RTRRFRSDLPPLSSEARPSGLDAAIRIPAPQHEPAADTAEINKVAANGSELGASEESMEE
RGKTASTFECNICFEMASEPVVTSCGHLFCWPCLYQWLNVYSNHKECPVCKGEVTEANIT
PIYGRGNSDGEKTLEDGKPQGPTIPPRPHGNRLESFRQQFHHMRPISRRLGEAHGILSSW
RRLLDQQIMNSVSRFEGPSESAAQEINDSAQHATRLSRLALATRMRARRLQREAESHPDG
SSTSPDTGLTGTNASEPSRRGPTPRVSDRFELLEHLTYIGIANTERLASAMSDLRRSAIS
DLRRIASPSQFGGSASSSNPQNNEPAVDGIHVAGAPSADQASNSSTVAVIQGDAGISESA
GEPSNAGSSRSLRRRGRSNALGSLDVDGGGPQRNKRRRMN
NT seq 1743 nt   +upstreamnt  +downstreamnt
atggaagccgatgaggccgcggggagcagcaggaggatggatctgaacctttacctcggt
ctcccccgcgccccgcgcccgcgccgctctgacctcggctccgacctcgccctcagcacc
ccgatgccctcttccccgtcgtcctccgccgcgtccgtcgacgcgccgccgccgccgccg
gaggccctgcacccgccgtactccccctcccgcgctgacctctcccctccgccgccagag
gtgtactccccctacaaccccgaggactcgcctgttccggacgcgcatctgtacatgcca
cctccggaaacgctcatccccgggcttcaaaacatgccgcctccagagccgctcatcccc
gggctccgagacgaacttgggtacgccttccagccgccgccgccgccgccgctggtgcgg
gccagcgaactgctggggtgggaggaccggccttcctcgtcaacggcctcctcatctttc
ttcccagaatctgccgcccagtacaggcggctgctcgagcaaactggaagccggtggctt
cgcacgagacggttcaggtctgaccttccacccctcagctccgaggctcgcccctctggg
ctggatgccgctatacgtataccggcgccccagcatgagcctgcagctgatactgctgaa
ataaataaggtggctgccaatggctcagaattaggtgcctcggaagagtccatggaggag
cgcggcaagactgcctccacgttcgagtgtaacatatgctttgagatggcaagtgagcct
gtagtcacttcctgtggtcatctattctgctggccgtgcttgtatcagtggttgaatgtt
tactccaaccacaaggaatgcccagtctgcaaaggtgaggttacggaggcaaatattact
cctatatatggtagagggaattcggatggagaaaagactctggaagatggcaagccacaa
ggtccgacgatcccgccaaggccacatggaaatcgccttgaaagcttcaggcaacaattc
caccatatgcgaccaatctcaagaaggcttggtgaggctcatgggatactgtcatcgtgg
aggcgccttctggaccagcagattatgaatagtgtgagtaggtttgaaggcccatctgaa
tcagctgcgcaggaaataaatgacagtgctcaacatgctactcgcctaagcaggttggca
ttggccacaaggatgagagcaaggcgactgcagagagaagctgagagccaccctgatggt
tcctccactagccctgatactggtttgacgggaaccaatgcatcagaaccatcgagacgt
ggtccaacaccacgtgtatcagacagatttgaattgttggagcatcttacctatattggc
attgcaaacacagaaagactggccagtgccatgagtgaccttagaagaagtgccataagt
gaccttagaagaatagcttcaccaagccaatttggaggatctgcttcatcatcaaatcct
caaaataatgagccagcagttgatggaattcatgttgctggagcaccttctgcagaccaa
gcatctaattcaagcactgttgcagtgatacagggggatgctggtatctcagagagtgct
ggagaacctagcaatgcaggttcttcgaggtccctgaggaggagagggaggagcaatgcc
ttagggtcgttggatgtggatggtgggggcccccaacggaacaagaggcgcagaatgaac
tga

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