Panicum hallii (Hall's panicgrass): 112893811
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Entry
112893811 CDS
T07366
Name
(RefSeq) AMSH-like ubiquitin thioesterase 3
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112893811
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phai01002
]
112893811
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112893811
04121 Ubiquitin system [BR:
phai04121
]
112893811
Enzymes [BR:
phai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112893811
Peptidases and inhibitors [BR:
phai01002
]
Metallo peptidases
Family M67
112893811
Membrane trafficking [BR:
phai04131
]
Endosome - Lysosome transport
Others
Others
112893811
Ubiquitin system [BR:
phai04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
112893811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
112893811
NCBI-ProteinID:
XP_025817096
LinkDB
All DBs
Position
5:37547551..37554731
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AA seq
510 aa
AA seq
DB search
MGPPQPARGGPINIEACARPIAVDNRISLPYYFRIAGSLLRQANIYRNEKNILDLYVILL
RYSSLLCETIPKHRDFLAFKFREKAFFDKLSDVIKELESLKPVVQRQVAEHNRGGTVESN
TNSLNGTYATTRRIEQHTPSLYTPQPFVGSTNGALQKSFQIGRQVPSLPSVQHDRQMHKQ
FMNLPYPSEETLARHSILGPNGLHGRWNVPVTGIKVQYPNNFELTQSDMTSLVPSILNQD
GSLGPSTAPPDSSTNDNEDMKSVLSLDDGRWSVPAEERTPIPSASLEEELFQLNIKQPSP
PPVLAEVQRPMSPSRVADPTPGLPTSGTARFQNLHVPIKLMECFLRVAESNTKRSLETCG
VLAGTLKKRTFYVTTLIIPKQKSTSNTCEATNEEELFEVQDSCSLFTLGWIHTHPTQSCF
LSSIDLHNHYSYQVMLPEAIAIVMAPTDTTRKHGIFHLTDPGGMGVIHDCQERGFHPHKA
PLDGSPIYEQCSHVYMDTDIKFDMIDLRER
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgggcccgccgcagccagctaggggcggccccatcaacatcgaggcgtgcgcgcggccg
atcgccgtcgacaaccgcatcagcctcccctactacttccgcatcgcgggcagcctcctt
cgacaggctaatatatatcggaacgagaaaaacatcctcgacctgtatgtaatccttctg
agatactcgagcttgttgtgcgagacgataccaaagcatcgcgatttccttgccttcaag
tttagagaaaaggcgtttttcgataaacttagtgatgttatcaaagagcttgagtcattg
aagccggttgtgcagcggcaggttgccgagcataacagaggaggtactgtggaatctaat
actaatagtctaaatggaacctatgctacaactcgtaggatagagcagcataccccaagc
ttgtatactccacagccatttgtaggtagcactaatggagcactgcaaaaatccttccaa
attgggagacaagtgccatcattaccgagtgtccaacatgataggcagatgcataaacaa
tttatgaacctgccttatccaagtgaagaaacactagctagacattccatattaggacct
aatggtcttcatggccgatggaatgtgcctgttactggaattaaggttcaatatccaaac
aattttgaattaacacaaagtgatatgacaagtttagtaccatccatcttgaaccaagat
ggttcacttggtcccagtacagcacctccggatagctccacaaatgacaatgaggatatg
aaatctgttctttctcttgatgatggtcgatggtctgtaccagcagaagaacgaacccca
attccttctgctagtttggaagaagagttgttccaattgaatatcaaacagccttctcct
ccaccagtcctggcggaggtacaaagacctatgtctccatcaagagttgctgatccaaca
ccaggacttccgacctcaggaaccgcccgttttcagaacttgcatgttccgatcaagttg
atggagtgttttctaagggttgctgaatcaaacaccaaaagaagcctagaaacttgtggg
gttcttgctggaaccctgaaaaaaagaactttttatgtgaccacattaattattccaaag
cagaaatcgacatctaatacgtgtgaagctacaaatgaagaagaactatttgaagttcag
gactcatgctcacttttcactcttggttggattcatacacatccaacacagtcctgcttc
ctgtcttccattgatctccacaaccattattcttatcaggtcatgctacctgaagcaatt
gcaatagttatggcacctactgacacaacaagaaaacatggtatatttcatctcacggat
ccaggtggtatgggtgtgatccatgattgtcaagagagaggtttccatcctcacaaggca
cctctggatggctcgccaatttacgagcagtgctcccatgtctacatggacaccgatata
aagtttgacatgattgatctccgagaacgatga
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