Panicum hallii (Hall's panicgrass): 112893817
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Entry
112893817 CDS
T07366
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phai03016
]
112893817
Enzymes [BR:
phai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
112893817
Transfer RNA biogenesis [BR:
phai03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
112893817
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GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
CheY-binding
Motif
Other DBs
NCBI-GeneID:
112893817
NCBI-ProteinID:
XP_025817102
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Position
5:5851151..5858176
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AA seq
782 aa
AA seq
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MGPSPMVARAAGGCSSAALAFFGFRPLRRAVRPAAAFSWSQSSPYGGCRSRLAHSLVDSI
LDELRSRRRVRVSAKIGLQGTKELSDNKIDKRALQKGLLLEFQKDSERSLLAVVERPDGK
KNWMVTDQNGILSSIKPQQVTYVVPGIMNFDSSRIDEFLKKAQDLLDPTVLECAWMELSE
KDKSITVEEFAEIVYGNKESLESYCAHFLLSRDIVYFFKVESRDYSMYQPRSPPQVEELL
RRKHAKEEAEKELEEFVHLLKSAKALPMESKPPKSSWLVDEKVRQKIEALQAYTVDACDD
EQRRLAGNILKAMGFTRTSSAALKLLINVGYFPVHVNLDLFKYDVRITYTEEVLSAAEEL
LVDRPDSDMNIRKDLSTLKVYAIDVDEADELDDALSAIRLPDGRIKVWIHVADPTCLIKP
RSIIDREAMHRGTSIFLPTATFPMFPERLAMNAMSLQQGKQCKSVSVSVTLHPDGSIAEY
TLENSVIKPTYMLTYESATELLYMNLEEEEELRILQEAASIRAQWRRSQGSIDTAMIEPR
IKVSNPDDPEPNINLYVEDQANPAMQLVSEMMILCGEAVAAFGADNNLPLPYRGHPQSNT
AVSAFSHLPDGPARSFANISALRAAEMDYQKPVPHGVLGIPGYVQFTSPIRRYVDLLAHY
QVKAFLRGDSPPYSAGDLEGMTFIASMHVKVARRLHSNSLRYWLLEYLRRQPKGRKYKAL
ILKFVKDRMAALLLVEVGMQVTTIVSRGKVGDEVSVAVDTAHPRDDILSIREVIEDTDDT
EE
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggggccgtcgcccatggtggcgcgggcggcgggcgggtgctcatcggcggcgctcgcg
ttcttcggcttccgccccctccgccgcgccgtccgcccggccgccgctttctcctggagc
cagtcctccccttacggcggctgcaggagccgcctggcgcacagcctggtggattctatc
ctggatgagctccgctcccggcggcgcgtccgggtctcggcaaagataggattgcagggc
acaaaagaactgtctgacaataagatagataagagagcattacagaaagggttgctgctt
gaatttcagaaagattcagagagatctttgcttgcagttgttgaacggcctgatggaaag
aaaaactggatggtgactgatcagaacggtatcttgtcttcgataaagccccagcaggtt
acatatgttgtccctggtatcatgaattttgactcttcaagaattgatgaatttcttaaa
aaagcgcaagatcttttggacccaacggttttggagtgtgcttggatggagctttctgag
aaggataaatcaataacggtcgaggagtttgctgagatagtgtatggtaacaaggagtct
ctggaaagctactgtgcacatttcttgttatcaagggatatagtctattttttcaaggta
gagagcagagattattccatgtaccaacctcgctcacctcctcaggtagaggaacttcta
cgacggaaacatgctaaagaggaagccgagaaggaactggaagaatttgtccacttactc
aagtctgccaaagcattgcctatggagtccaagcctcctaaaagttcatggttggttgat
gagaaagtcaggcaaaaaatcgaggctcttcaagcatacacagttgatgcatgcgacgat
gaacaaagaagactagcaggaaatattctcaaagctatggggttcacaaggacgtcatca
gctgctttaaagctccttataaatgtcggttacttccctgtgcatgtcaaccttgatctt
tttaagtacgatgttcgtatcacgtacaccgaggaagttttgtctgctgcggaggagctt
ttggtggacagacctgattcagacatgaatatcaggaaggatctttcgactttgaaggtg
tacgccattgatgtagatgaggctgatgaacttgatgacgcattgagcgcaatcaggctc
cctgatggtaggataaaggtctggatacatgttgctgatccaacgtgcttgatcaaacct
cggagcatcattgatagggaggcaatgcacagaggaacctcaatctttctaccaactgct
acgtttccgatgttcccagagaggcttgccatgaatgctatgagcttgcagcagggtaaa
caatgcaaatctgtaagcgtatctgtgactttgcacccagatgggagtattgcagaatat
actctagagaattcagtcatcaaacctacctacatgttgacatacgagagtgcaactgaa
ttgctttacatgaacctggaagaagaggaagaactaaggattctccaagaagctgcttcc
atccgtgcacagtggcgtcgtagccagggttcaatagacactgcaatgatagagccacgt
atcaaggtgtcaaatcctgatgatcctgaaccgaatattaatctatatgttgaagaccaa
gccaatccggcaatgcagcttgtatctgaaatgatgatactttgtggcgaggcagtggct
gcttttggtgctgataacaatctccctttgccatacagaggtcacccccagtctaacacg
gcagtgtcagcattttctcatctaccagatgggcctgcaaggagctttgccaatatcagt
gcgctccgcgctgcagaaatggattatcaaaaacctgtaccacatggtgtacttggtatt
ccaggctacgtgcagttcacctctcctattcgaagatatgttgatttgctagctcattac
caggtaaaagcttttcttagaggtgattctccaccatattcagctggtgacctagaagga
atgacatttattgcgagcatgcatgttaaagtagctaggaggcttcatagcaacagctta
cggtactggttgttggaatacttgaggagacagccaaaggggaggaagtacaaagcactg
attcttaagtttgttaaggatcgtatggcagctctgcttttggtggaggttgggatgcaa
gttacaacaatagtctcgcgtgggaaagtgggagatgaagttagtgttgctgtggacacg
gctcatccgcgtgacgatatcttatcaatcagagaggttattgaggataccgatgatact
gaggagtaa
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