Panicum hallii (Hall's panicgrass): 112893892
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Entry
112893892 CDS
T07366
Name
(RefSeq) uncharacterized protein LOC112893892 isoform X1
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
112893892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phai03400
]
112893892
DNA repair and recombination proteins [BR:
phai03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
112893892
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_ZFYVE26
TPR_2
TPR_14
Motif
Other DBs
NCBI-GeneID:
112893892
NCBI-ProteinID:
XP_025817200
LinkDB
All DBs
Position
5:complement(16779318..16804692)
Genome browser
AA seq
2441 aa
AA seq
DB search
MAASEREAALLARVAANHLFLAQFEALRAALLSLRRRADPGLAADFLRAVVAAGGRVPGV
LWSAPPACPSPSHLAWLAALELAALPSTPNPEALRLKAEFLVLLQPIADDPAVGAEARET
LTRLLDLGVVRLRREVEGGGGEAGAGVQEASVTEEDLKGLWGVFLDNALVFDALCVGVSR
QIGLDGGFGADVLLLLRQNVQLAHLDAVKTLLAEDDLDGAAGHLRFLCLDHGVQEDEYKL
VISELLRKGWAKASNYGGRWSQLRDRITKMYGAALQSTSPQLVQLFQVILDDIVSEEIED
HNVSDTNRMPLPFTKFVETLSLERGTDSDDTDDRTLLDAAVTSCKKDLYHYCRLSGKHML
EVVLETALSSIKREQLQEAVDVVSLFPLLQPLVAVLGWDILKGKTALRKKLMQLFWTSKS
QALRLQEYSHYRSKTDETSCEEYLCDLLCFHLDLACFVSSVNSGRPWNLRNSLLFSQQHQ
GSDVNNAEILDPFVENLILERLAVQTPMRVLFDVVPGIKFQDAIELVGMQPLPSTTAAWK
RIHDIELMHMRYALQSVVLALGEMEKCAGDGNECYYHKALSYLREMQNFMEAIKSTPRKI
FMVSIILSLLHMDDSVKLSQAVPSECHVTHECHDSNIESEGKNMVVYFVGLLLDILRHNL
QVKGPDMDHLSSTSLSSAGRQALEWRLKHAKHSIEDLDWRLSVLKRLQPLSERQWSWKEA
LVLLRAAPSKLLNVCMQRENYDIGEEAIQRFSLPAEDKASLELAEWVAGAYKRALVEDAV
NRATNNTNAAQELDILSLRAQLGSLTTILLCVDVAATSARSGDMCRFLLDEATSLLSEIF
PGSSPKVGTTYWDQVQELAMISVIKRILQRLHDILDLEALPYLQVFFTEMSISSTTESSR
VGQKQRPLGLLHQMIDDAFKGKRQFLSGKLHNVARAIVDEDFDSVYAKEGVNLEKKDVLS
SEKGVVLGHGLRILKQASRSDLASSNVLESSSEHKGSANRYMSPLSTKPSTYLSNFIIYI
ATIGDIVDGTDTTHDFNYFSLVYEWPKDLLTRLVFERGSTDAAAKVADTMGVDFVHEIIS
ACVPPVLPPRTGHGWACVPVIPILCNISSENRSSAIPKSLPPAQGWSAHDSSLSSRQEPL
YPLQLNLVKHLAQLSSVRAVLACVFGSSLLSGDNESSPTYVKDTAQTPEIERSFFEFALE
QSERYPTLNRWIQMQSNLHRVSESSVTDKSESEVSLHQSKGKFSMKRAREPDSDGESELE
DIVISGNTTSSPLESPKHEDTRLEPTTFISFDWENEGPYEKAVERLISEGKLTDALAVSD
RCLRNGASDKLLQLLIEQKEERSLGTGQIRAYGSHNLGSDTWQYCLRLRDKKLAAQLALK
YLRSWDLDAASNVLTMCMCHLPEKDPMRSEQVLHMKQSLQRYGHIMSADDHYTRWQEVEA
DCEDDPEGLALRLAAKGAVSAALEVAESASLSIDLRRELQGRQLVKLLTTDPLNGGGPAA
ASRFLSTLRDSNDALPVAIGAMKLLPDLRSKQLLVHFFLKRTVGSLSDAEIARLNSWALG
LRVLSLLPLPSQQRCSSLHEHPQLIIEVLLMMKQFQSASLILKEFPALRDDRLIISYAKK
AISINVSSTPRERRLSISASRAKQKKVTTPVKTNFAQSFGNFQREARKAFSWVPRDSGTK
TPPKDTPRKRKSSGSGGDRSSWDAMPGVQEERTPVYSSEGQDRLPFVSAPDEWVLTGDPD
KDDATRSSHRYETSPDITLFKALISLCTDESVAAKGALELCMTQMKVVLSSQQLPLDASM
DNIARAYHATETYVQALSYAKNLLKKLVGSSDLSSGSERSRDVDDISVDTGSSSAGSQYL
DELSDLLAQADMWLGRAELLQSLLGSGIIASLDDIADKESSTRLRDRLVSDERYSMAVYT
CRKCKIDAFPVWVAWGHALVRMEHYAQARVKFKQALQQYKGDAATVVTEIINTIEGGPPV
DVSSVRSMYEHLAKSAATIFDDSLSADAYLNVLYMPSTFPRSESSRQSRDPIDNQFTSAS
LYLEDGPRSNLDSVRYAECIHYLHDYARPQMLAFMFRHGHYAEACSLFFPFNQPTTEGET
SLSSVPWSDPLTTDYGTIDDLCDLCLGYGAMAVLENTIRAVTQSPAYHETPVIQYMNTVL
TRICNYCETHRHFNYLYNFLVLKDDHVASGLCCIQLFMNSMSQEEALRHLGHAKTHFEEA
LSVRDRTMEATKLVLRSARNKSTPGKMTRETIMKYSTRVSYQMDVVKALNNIDGPQWKTS
LFGNPTDPETLRRRCMVVETLAEKHFDLAFRMLHEFDLPAVDIYAGVAASLAERKKGGQL
TEFLKNIRGTIDDDEWDQVLGAAINVYANKHKERPDRLIDMLISHHRKVLACVVCGRLKS
AFQIASRSGSVADVQYVAHQALHANALPVLDMCKQWLAQYM
NT seq
7326 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgtcggagcgggaggccgcgctcctcgcgcgcgtggccgcgaaccacctcttc
ctcgcgcagttcgaggcgctgcgcgcagcgctcctcagcctccgccgccgcgccgacccg
gggctcgccgcggacttcctccgcgcggtcgtcgccgcggggggccgcgtcccgggcgtg
ctctggtccgcgccccccgcctgcccatccccgtcccacctcgcctggctcgccgcgctc
gagctcgccgccctcccctccacccccaaccccgaggcgctgcgcctcaaggccgagttc
ctcgttctcctccagcccatcgccgacgaccccgccgttggcgccgaggccagggagacc
ctcacgcggctgctggatttgggggtggtgaggctgaggcgcgaggtcgagggaggcgga
ggggaggctggcgctggtgtccaggaggcctcggtcaccgaggaggatctgaaggggcta
tggggggtgttcctcgataacgcccttgtatttgacgcattatgcgtgggcgtctcgagg
cagatcggcttggacgggggtttcggcgctgatgtgctcctgttgctgcgtcagaacgtg
cagcttgcccacttggacgccgtgaagacactgcttgcagaggatgatcttgacggtgct
gctggccatctccggtttctttgtctggatcatggcgtgcaggaggacgagtacaagctt
gtcatatcagagcttctcagaaagggttgggcaaaagcatccaattatggtggaagatgg
tctcagttgcgggatagaataactaaaatgtacggagcagctcttcagtctactagtccc
cagctcgtgcaactgtttcaagtcattctggatgacattgtttctgaagaaattgaagat
cataatgtctctgatactaataggatgcctcttcctttcacaaaatttgtggaaacattg
tcattggagaggggtactgactcagatgacacagatgacaggaccttgttggatgcagct
gtaacatcctgcaagaaagatctgtaccattattgtcgactctctggaaagcatatgctt
gaagtagtcttggaaactgctctatcatcaattaagagggagcagcttcaagaagctgtt
gatgttgtttcgttgttcccccttctccagccattggttgctgtcttggggtgggatatt
ctgaagggtaaaacagctctacggaaaaaactaatgcagctgttctggacaagcaaatcc
caagctttacgactacaggaatattcacattaccgtagtaagacagatgagacatcctgc
gaggagtacttgtgtgatcttttatgctttcatctggatcttgcatgttttgtttcaagt
gtgaattctggccgcccatggaatttaaggaattcattattgttttcccaacagcatcaa
ggttcagatgttaacaatgcagaaatattagacccttttgtggagaacttgatacttgag
cgcctagctgttcagactcccatgagagtgctatttgatgtagtcccaggaataaaattt
caagatgcgattgagcttgttggtatgcagccacttccttcaacaactgcagcttggaag
aggatacatgatattgaactgatgcacatgcgatatgctcttcagtcagttgtacttgct
ctaggagagatggagaagtgtgcaggtgatgggaacgagtgttattatcacaaagcgttg
tcatatctgagggagatgcaaaattttatggaggctatcaaaagtactccaagaaagatt
ttcatggtcagcattatattatcattgttacatatggatgactctgtcaaactgtctcaa
gcagtcccttctgagtgccatgttactcatgaatgccatgatagtaatatcgaatctgag
ggaaagaacatggtggtatattttgttgggcttctacttgatatacttcgtcataatctc
caagtgaaaggccctgatatggatcacctgtccagtactagtctgtcatctgctggtagg
caagcattagaatggaggctcaaacatgccaaacattccattgaagacttggattggcgt
ctatctgttctaaagcgtcttcaacctttatctgagaggcaatggagttggaaggaggca
ttagttcttctacgtgctgctccttcaaagttattgaacgtatgcatgcaaagggaaaac
tatgatataggagaagaagctatacagagattttctctacctgccgaggataaagcttct
cttgaactagctgaatgggtagctggcgcatataaaagagcattggttgaagatgctgtg
aatcgtgctaccaataacacgaatgcagcacaagaattagatattttgtcattacgtgct
cagcttggttctctaactacgattctgctttgtgttgatgttgctgcaacatctgctagg
tcaggtgatatgtgccgatttcttcttgatgaggcaacaagcttgctatctgaaatattt
ccagggagctccccgaaagtaggcacaacttactgggatcaggtccaagaacttgctatg
atatcggtgataaagcgcatccttcagcgtctgcatgacatcttggatctggaagctctt
ccatatcttcaagtgttttttaccgagatgagcatctcttcaacaactgaatctagcaga
gttggacaaaagcaacgtcctcttggtcttttacaccaaatgattgatgatgccttcaag
ggaaagcgacaattcttgagtggtaaacttcacaatgttgctagagctattgttgatgaa
gactttgatagtgtttatgcaaaggaaggtgtcaacttagaaaagaaagatgttttgagt
tctgagaaaggtgtagtccttggtcatgggcttaggatactgaaacaagcatctaggagt
gaccttgcatcttcaaatgttctggaaagcagttcagaacacaaaggttctgcaaataga
tacatgagtcctctatctaccaagccatcaacatatttatcaaacttcataatatatatt
gcaaccatcggtgacatagttgatggaactgatacgactcatgatttcaactacttctca
ttagtctacgaatggccaaaagatctattaactcgtctagtttttgagcgtggaagcact
gatgcggctgcaaaggtagctgacacaatgggtgttgattttgtgcacgagattatatca
gcatgtgtgccacctgttttacctccacgaacaggacatggatgggcttgcgttcctgtt
atacctattctttgtaatattagttcagaaaacagatcatctgccattccaaagtccctt
cctcctgctcaaggatggagtgcacatgattcgtcattatcttctcgtcaagaacccctc
tatcctcttcagttaaatttagtgaagcatttagcccagttatcatcagtaagagcagtt
ttggcatgtgtatttggaagtagcttactatctggtgacaacgaatcatctcctacttat
gtgaaagatacagctcaaacccctgaaatcgagaggtcattttttgaatttgctctcgag
caatcagagagatatccaaccttgaaccggtggatacagatgcagtctaatcttcatcga
gtatctgagtcatccgtgacagataaatctgaaagtgaagtctctttgcatcaatccaag
ggaaagttttctatgaagcgagcccgcgaacctgatagtgatggtgagtcagagcttgaa
gatattgtaataagcgggaacactacttcaagtccgctagaatcccctaaacatgaagat
actagactagagccaaccacttttatttcatttgattgggagaatgaaggaccatatgaa
aaagctgttgagaggctaattagtgaaggaaaactaactgatgctcttgctgtatctgat
cggtgtttgcgaaacggagcatctgataaattgcttcaactgctcatcgaacaaaaggaa
gaaagaagtctaggcacaggacaaattcgtgcatatggatctcacaatcttgggagtgat
acttggcaatactgcttgaggctaagagacaaaaaacttgcagctcagcttgccttaaag
tatctgcgcagttgggaccttgatgctgcctctaatgtccttactatgtgcatgtgccac
ttacctgagaaggatcccatgcggagtgagcaggtgttgcacatgaagcaatctttacag
cggtatggtcatattatgagtgctgatgaccactacaccagatggcaagaggttgaagcc
gattgtgaagatgacccagagggcttggcactccgtcttgctgctaaaggagctgtttcc
gctgctttagaggttgctgaaagtgcctctttatcaattgatctgcggagagagttgcaa
ggacgccaacttgtcaaactgctaaccactgatccacttaatggtggaggcccagccgca
gcttcaagatttctgtcaaccttaagagattccaatgatgctcttcctgtagccattggt
gctatgaagctattacctgacttgcgttcaaagcagcttcttgtacattttttcctcaag
cgtacagttgggagtctgtctgatgctgagattgcacggcttaattcatgggcattaggt
cttcgtgttctttccttattgccattgccatcgcaacagcgttgctcttctctgcatgaa
caccctcagttgatcatagaagtactattgatgatgaaacaattccagtctgcttctttg
attttgaaagaatttcctgcactgagggatgataggttaatcatttcttatgccaagaaa
gcaatctccattaatgtcagttcaactcctagggaacgtcgactgagcatctccgcatca
agagcaaaacaaaaaaaggtcactactccagttaaaacaaattttgcgcagagttttggt
aacttccagagagaagctcgcaaagcattttcgtgggtcccccgtgacagtggcactaaa
acacccccaaaagatactccccggaaaagaaaaagttcaggttcaggtggtgatagatcc
tcttgggatgcaatgcctggtgtacaggaggagcggacacctgtatattcttctgaaggg
caagatagacttcctttcgtctctgctcctgatgagtgggtgctgacgggagaccctgac
aaggatgacgcaacacgttcatctcatagatatgaaacctctcctgacatcacactgttc
aaggcattaatttccttgtgcaccgatgagtcagtagctgcaaaaggtgcacttgaactg
tgtatgactcagatgaaggttgtacttagctcccaacaattgccccttgatgcctctatg
gataacatagctcgagcttatcatgcgacggaaacttatgtacaggccctctcttacgca
aaaaatctacttaagaagctcgttgggagtagtgatttgtcaagtggctctgaaagaagt
agggatgtcgatgatatttctgtggacactggcagttctagtgctgggagccagtatcta
gatgagctgtctgatctcctggctcaagcagacatgtggttagggcgtgcagagcttctt
caaagcctgctgggatcaggtatcattgcctcgcttgatgatatcgctgacaaagaatct
tcaactcgtctacgtgacagattggtcagcgacgaacggtacagcatggctgtatatact
tgtagaaagtgcaagattgacgcttttccagtatgggttgcatggggccatgctttagtt
cgaatggagcactatgctcaagcccgtgtgaagttcaagcaagcacttcaacaatacaaa
ggcgatgcagctactgttgttactgaaatcatcaacacaattgaaggaggacctccggtt
gatgtttcttctgtccgttccatgtatgagcatttggcaaagagtgcagcaaccatcttt
gatgattccctttctgctgatgcttatcttaatgttctgtacatgccatccacattccca
cgatctgagagttcccgacagtccagagatcctatagacaaccaattcacatctgctagc
ttgtaccttgaagatggtcctcgcagcaatcttgacagtgtcagatatgccgagtgtatt
cattacttgcacgattatgctcggccacaaatgctggctttcatgttcaggcatggccat
tatgctgaagcatgctctctgttcttcccttttaatcaaccaaccactgaaggggaaact
tctttgtcttcagttccatggagtgacccgttaacaactgactatgggacaattgatgac
ttgtgcgacctatgtcttggatatggtgccatggctgttttggagaacacaatacgggca
gtaacacaatcacccgcatatcatgagacacctgtgatccagtacatgaacactgttctc
acccgcatttgcaactattgtgaaacacataggcattttaattatctctacaactttttg
gttctaaaagatgaccatgttgcttctggcctttgttgtatccaattatttatgaattcg
atgtctcaggaggaggctttgaggcatttgggacatgccaagacacattttgaagaagcc
ttatctgtacgagatagaacgatggaggctacaaagttggtattgcggtctgctcggaat
aagagcacaccaggaaaaatgaccagagaaactataatgaaatattccactcgggtttcc
tatcagatggatgtagtgaaagccctcaacaatatagatggtcctcagtggaaaacttcc
ctttttgggaatcctactgaccctgaaactctgaggcgaagatgcatggttgttgaaact
ctggctgaaaagcattttgatttagctttcagaatgcttcatgagtttgatctcccagct
gttgatatttatgctggtgtagctgcatccctcgctgaaaggaaaaaaggtggccaacta
acagagttcctgaagaacataaggggtactatagatgatgatgaatgggatcaggttctt
ggtgctgctataaatgtttatgccaacaagcataaagaaagaccagatcgacttattgac
atgctaatcagccatcacaggaaagtacttgcttgtgttgtctgtgggcgtctaaaaagt
gcattccaaatagcctcgcgaagtggaagtgttgctgacgttcaatatgttgctcatcag
gcgttacatgcaaatgcattgccggttcttgatatgtgtaagcaatggctggcccagtac
atgtga
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integrated database retrieval system
