Panicum hallii (Hall's panicgrass): 112894049
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Entry
112894049 CDS
T07366
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phai03000
]
112894049
03036 Chromosome and associated proteins [BR:
phai03036
]
112894049
Transcription factors [BR:
phai03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
112894049
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
112894049
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
Rttp106-like_middle
SSrecog
HMG_box
HMG_box_2
HMG_WDHD1
HMG_box_5
CDC45
Nop14
YL1
Motif
Other DBs
NCBI-GeneID:
112894049
NCBI-ProteinID:
XP_025817406
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Position
5:56755737..56763711
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AA seq
639 aa
AA seq
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MTDGHHFNNILLGGRGGTNPGQFKVHSGGLAWKRQGGGKTIEIDKADVTSVTWMKVPRAY
QLGVRIKDGLFYRFIGFREQDVSSLTNFIQKNMGVTPDEKQLSVSGHNWGGIDIDGNMLT
FMVGSKQAFEVSLPDVAQTQMQGKTDVLLEFHHDDTTGANEKDSLMDLSFHVPTSNTQFV
GDENRPPAHILWETILKFADVGSSEEPVVTFEGIAILTPRGRYSVELHLSFLRLQGQAND
FKIQYSSIVRLFLLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFETEAVVERDLALSK
ELLAEKYKDRLEESYKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDGYAVKSSLKAEDGL
LYPLEKGFFFLPKPPTLILHEEIEFVEFERHGAGGASMSSHYFDLLVKLKNDQEHLFRNI
QRNEYHNLFNFINGKNMKIMNLGGDGQGTSGVVTDVLRDTDDDAVDPHLERIKNQAGDEE
SDEEDEDFVADKDDSGSPTDDSGDEESDASDSGGEKEKSSKKEASSSKPVQKRKPKGRDE
DGSEKKKAKKKKDPNAPKRAMTPFMYFSMAERGNMKNSNPDLPTTEIAKKLGEMWQKMSS
EEKQPYIQQAQVDKKRYEKESAVYRGEAPVDVDSGNESD
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggtcaccacttcaacaacatcctcctcggagggcgcggcggcacgaaccct
ggtcagtttaaagtgcattctggtggacttgcgtggaagagacaaggtggaggaaagacc
attgaaattgacaaagctgatgtaacctcagttacatggatgaaagtacccagagcatat
caacttggagtcaggattaaagatggcctgttctacaggtttattggcttccgtgaacag
gatgtaagcagtttgaccaacttcatacaaaagaatatgggtgtcacaccagatgaaaag
cagctttctgttagcggtcacaattggggagggattgatatagatggaaacatgcttacc
ttcatggttggttcaaagcaagcatttgaagtgtctctaccagatgttgctcaaacccag
atgcaaggaaaaacagatgttctcttagaatttcatcatgacgatactactggggccaat
gagaaagattcgctcatggatttaagctttcatgtgcctacatcaaatactcagtttgtc
ggggatgagaatcgccctccagctcatattctttgggagactatactgaaatttgctgat
gttggttcctctgaagagccagttgtcacctttgaaggaattgcgattcttacaccaaga
ggacgttatagtgttgagcttcatctgtcatttctacgactccaaggacaagctaatgac
tttaaaatccaatacagcagcattgttcgcctctttcttttgccaaagtcaaacaatcct
catacatttgttgttatcactcttgatccaccaatccgtaaagggcaaacattgtatcct
cacattgttattcagtttgagacagaggcagtagttgaaagagacctggcattgagtaaa
gagcttctggctgaaaaatacaaagacaggcttgaggaatcttacaagggtctaatacat
gaggtatttaccaaagtccttcgtgggttatctggtgctaaagtcacaagaccaggttct
ttcagaagttgccaagatggatatgcagttaaatcttcactcaaagctgaagatggactt
ttgtatccacttgagaagggtttcttctttctgccaaagcctccaacactcatcctgcat
gaggagattgagttcgttgaatttgaacggcatggtgctgggggtgccagtatgtcatct
cactattttgacctccttgtcaaactgaaaaatgaccaagaacatctcttcagaaatatc
caaaggaatgaataccacaacctcttcaacttcatcaatggaaagaacatgaaaataatg
aaccttggaggagatggtcaaggtacaagtggtgtagttacagatgttctacgggacact
gatgatgatgctgttgacccacatctagagcgtattaaaaatcaggccggggatgaggaa
agtgatgaagaggacgaagattttgttgcggataaggatgacagtggatctcctactgat
gactctggtgatgaggaatcagacgctagtgatagcggtggcgaaaaagagaaatcatcc
aagaaagaagcaagcagttcaaagcctgttcagaaaaggaagcctaaaggaagggatgag
gatggttcagagaagaaaaaagcaaagaagaaaaaagatcctaatgctcccaaaagagca
atgacgccgttcatgtatttctcaatggctgagcgaggaaacatgaagaacagcaaccct
gatttgcctacgactgagattgcaaagaagcttggggaaatgtggcaaaagatgtcaagt
gaagagaaacagccttacattcagcaggcccaggttgacaagaaacgctatgaaaaggaa
tccgctgtctatcgtggtgaggcaccagttgatgtggattccggcaatgagtctgactag
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