Panicum hallii (Hall's panicgrass): 112894093
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Entry
112894093 CDS
T07366
Name
(RefSeq) cyclic nucleotide-gated ion channel 4-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112894093
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phai04040
]
112894093
Ion channels [BR:
phai04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112894093
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
Motif
Other DBs
NCBI-GeneID:
112894093
NCBI-ProteinID:
XP_025817477
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Position
5:7936304..7939874
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AA seq
665 aa
AA seq
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MMLADLSVRPAASAPSPQGAARRAATGEGDEKPTSSPGAGRGAWAAALDQRAGWAREWDR
AYLLACAAGLVVDPLFLYAVCLSAPLMCVFLDGWFAAAVTALRCAADAMHAWNLMLRLRD
ARAPPARGDADEEAARPGRDDALGGGAVPERRARSRNKKGIILDVFVILPVMQVIVWAAA
PAMIRAGSTTAVMTVLLVAFLFEYLPKIYHSVCVLRRSQDASGYVFGTIWWGIALNLMAY
FVAAHAVGACWYLLGAQRATKCLREQCAQAGSGCAPGALACAEPLYYGAAAAAPGAGRLA
WAGNATARGTCLDSGDNYQYGAYKWTVMLVANPSRVERILLPIFWGLMTLSTFGNLESTT
EWLEIVFNIITITGGLILVTMLIGNIKVFLNATTSKKQAMHTRLRSVELWMKRKNLPRSF
RQRVRQYERQRWAATRGVDECRIVRDLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLEN
ICDRVKSLIFPKGEVIVREGDPVRRMLFIVRGHLQSSQALRTGATSRCTLGPGNFSGDEL
LSWCLRRPFLERLPASSSTLATLESTEAFGLDAADVRYVTRHFRYTFTNDRVRRSARYYS
PGWRTWAAVAVQLAWRRYKHRKTLASLSFIRPRRPLSRCSSLGEEKLRLYTALLTSPKPN
QDDLL
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgatgctagccgacctctcggtgcgcccggccgcgtcggcgccctcccctcaaggcgcg
gcgcggagggcagcaaccggcgagggagatgagaagccgacgtcgtcgccgggagcaggc
cgcggggcgtgggcggcggcgctggaccagcgggcggggtgggcgcgggagtgggaccgc
gcgtacctgctcgcctgcgcggcggggctcgtggtcgacccgctctttctctacgccgtc
tgcctcagcgcgccgctgatgtgcgtcttcctcgacggctggttcgccgccgcggtcacc
gcgctccggtgcgcggcggacgccatgcacgcctggaacctgatgctgcggctccgggac
gcgcgcgcgccgccggcgcggggggacgcggacgaggaggcggcgcggccgggccgcgac
gacgcgctcggcggcggcgccgtgccggaacgacgggcgaggtccaggaacaagaagggg
attatcttggacgtgttcgtcatcctaccggtgatgcaggtgatcgtctgggcggcggcg
ccggcaatgatacgcgcgggctcgacgaccgccgtcatgaccgtgctgctggtggcgttc
ctgttcgagtacctgcccaagatctaccactccgtctgcgtcctgcgccggtcgcaggac
gcctccggctacgtcttcggcaccatctggtgggggatcgcgctcaacctcatggcctac
ttcgtcgccgctcatgcggtgggcgcgtgctggtacctgctcggcgcgcagcgggccacc
aaatgcctccgggagcagtgcgcccaggccgggagcgggtgcgcgcccggggcgctggcg
tgcgcggagccgctctactacggcgccgcggcggcagcgcccggcgcgggcaggctcgcc
tgggccggcaacgccaccgccaggggcacgtgcctcgacagtggcgacaactaccagtac
ggggcctacaagtggacggtcatgctggtggccaaccccagcagggtcgagaggatcctg
ctcccgatcttctgggggttaatgactctcagcacgttcgggaacctggagagcacgacg
gagtggctggagatcgtgttcaacatcatcaccatcaccggtgggctgatcctcgtgacc
atgctcatcggcaacatcaaggtgtttttgaacgcgacgacgtccaagaagcaggcgatg
cacacgcggctgcggagcgtggagctgtggatgaagcggaagaacctgcccaggagcttc
cggcagcgggtgcggcagtacgagcggcagcggtgggcggccacgcgcggcgtcgacgag
tgccgcatcgtccgcgacctccccgaggggctccgccgggacatcaagtaccacctctgc
ctcgacctcgtgcgccaggtgccgctgttccagcacatggacgacctggtgctcgagaac
atctgcgacagggtcaagtccctcatattccccaaaggagaagtcatcgtcagagaaggg
gacccggtgaggcggatgctgttcatcgtgcgcgggcacctgcagagcagccaggcgctc
cgcaccggcgccacgagccggtgcacgctggggccgggcaacttcagcggcgacgagctg
ctgtcgtggtgcctgcgccggccgttcctggagcggctgccggcgtcgtcgtccacgctg
gccacgctggagagcaccgaggcgttcgggctggacgccgcggacgtcaggtacgtgacg
cgccacttccgctacaccttcaccaacgacagggtgcggcgcagcgcgcgctactactcg
cccgggtggcggacgtgggcggccgtggccgtgcagctcgcgtggcggaggtacaagcac
cgaaagacgctcgcgtcgctgtccttcatccgaccgcggcggccgctgtcgcggtgctcg
tcgctgggggaggagaagctccgcctctacaccgcgctgctcacctcgcccaagcccaac
caggacgacctgctgtga
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