KEGG   Panicum hallii (Hall's panicgrass): 112894119
Entry
112894119         CDS       T07366                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-1
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03010  Ribosome
phai04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    112894119
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    112894119
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:phai03011]
    112894119
   04121 Ubiquitin system [BR:phai04121]
    112894119
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:phai04147]
    112894119
Ribosome [BR:phai03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    112894119
  Archaea
    112894119
Ubiquitin system [BR:phai04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   112894119
Exosome [BR:phai04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112894119
  Exosomal proteins of colorectal cancer cells
   112894119
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Dsc3_N Plexin_RBD Thioredox_PDIA6_C DUF2604 UBL_UBAC1 TBK1_ULD Fer2_3 Ubiquitin_5 Ogr_Delta OTU1_UBXL
Other DBs
NCBI-GeneID: 112894119
NCBI-ProteinID: XP_025817516
LinkDB
Position
5:47328943..47329749
AA seq 155 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDDATGKVTRLRK
ECPNAECGAGTFMANHFDRHYCGKCGLTYVYNQQA
NT seq 468 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagaccctgacggggaagaccatcacgctggaggtggagtcctcg
gacaccatcgacaacgtgaaggccaagatccaggacaaggagggcatcccgccggaccag
cagcgcctcatcttcgccggcaagcagctcgaggacggccgcaccctcgccgactacaac
atccagaaggagtcgacgctgcacctggtgctccgcctccgcggaggagccaagaagcgc
aagaagaagacgtacaccaagcccaagaagatcaagcacaagcacaagaaggtgaagctc
gccgtgctccagttctacaaggtcgacgacgccaccggcaaggtcacccgcctccgcaag
gagtgccccaacgccgagtgcggcgcggggaccttcatggccaaccacttcgaccgccac
tactgcggtaagtgcggcctcacctacgtctacaaccagcaggcgtag

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