Panicum hallii (Hall's panicgrass): 112894224
Help
Entry
112894224 CDS
T07366
Name
(RefSeq) transcription factor CSA-like isoform X1
KO
K09422
transcription factor MYB, plant
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phai03000
]
112894224
Transcription factors [BR:
phai03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
112894224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
DUF6581
DUF995
Motif
Other DBs
NCBI-GeneID:
112894224
NCBI-ProteinID:
XP_025817645
LinkDB
All DBs
Position
5:51189138..51190808
Genome browser
AA seq
353 aa
AA seq
DB search
MVREMACFSGCAPPAAALSPFHVEQEPAAVPEEVYHGHVEDPEEVSTGRGHGGSSGQGKL
CARGHWRPAEDAKLKELVAQHGPRNWNLIAEKLDGRSGKSCRLRWFNQLDPRINRRAFTE
EEEERLLAAHRAYGNRWALIARLFPGRTDNAVKNHWHVLAARRQRERSGAIRRRKPSSSC
TTTTSSSHFAPAVAVAATVRSHYGSPPLPSHAGGAHAQHGIRTEAAATRACSGGESEESA
STCTTDLSLGSAGATAAPCFHHSSNDGTGPRRFIRFARVSLTVCCFALADMASVLSVRAA
GYDMAPRAAAFAPGARSAFSVPSPARHRAAACDDDSCGSLARHFYDFLGVGAT
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggttcgtgagatggcttgtttctccggctgtgctccaccggcggcggctctgtctccg
ttccatgtcgaacaggagccggccgccgtcccggaggaggtgtaccacggccatgtagag
gacccggaggaggtcagcaccggccgtggccacggcggcagcagtgggcaggggaagctc
tgcgcgaggggccactggcggcccgcggaggacgccaagctcaaggaactcgtcgcgcag
cacggcccccggaactggaacctcatcgccgagaagctcgacggccgatcagggaagagc
tgccggctgcggtggttcaaccagctggacccgcggatcaaccggcgggcgttcacggag
gaggaggaggagcgcctcctggcggcgcaccgcgcatacggcaacaggtgggcgctcatc
gcccgcctcttcccggggcgcaccgacaacgccgtcaagaaccactggcacgtcctcgcc
gcgcgcaggcagcgcgagcggtccggcgcgatccgacgccgcaagccttcgtcctcctgc
accaccaccacctcttcgtcgcacttcgcgccggccgtcgccgtcgccgcaaccgtccgc
agccactacggctcccctcccctgccgtcccacgccggcggtgcgcacgcccagcacggc
atccgcacggaggcggcggccacccgcgcgtgcagcggcggcgagtccgaagagtccgcg
tcgacctgcaccaccgacctctccctcggctccgccggcgcgaccgccgccccctgcttc
caccatagttcgaacgacggtacgggtcctcgtcgcttcatacgcttcgcccgcgttagt
ctcacggtgtgttgcttcgctctcgctgacatggcctctgttttgtctgtccgcgccgca
ggctacgacatggcccctcgcgccgccgcgttcgcgcccggcgcgcgctccgcgttctcc
gttccctccccagcgcgccaccgtgcggcggcctgcgacgacgacagctgcggcagcctc
gcccggcacttctacgacttcctcggcgtcggtgcgacatga
DBGET
integrated database retrieval system
