Panicum hallii (Hall's panicgrass): 112894329
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Entry
112894329 CDS
T07366
Name
(RefSeq) protein HIRA-like isoform X1
KO
K11293
protein HIRA/HIR1
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phai03036
]
112894329
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
112894329
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
WDR55
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
112894329
NCBI-ProteinID:
XP_025817779
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Position
5:complement(56828059..56834547)
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AA seq
1002 aa
AA seq
DB search
MITEKPTWIRHEGLQIFSIDIQPGGLRFATGGGDQKVRIWSMKSVDKDNASDDSSQRLLA
TMRDHFGSVNCVRWAKHGRYLASGSDDQVILIHERKAGSGTSEFGSGEPPDVENWKVIMT
LRGHTADVVDLSWSPDDSTLASGSLDNTVHIWNMTNGICTAVLRGHSSLVKGVTWDPIGS
FIASQSDDKTVIIWRTSDWSLAHKTEGHWAKSLGSTFFRRLAWSPCGHFITTTHGFQKPR
HSAPVLERGEWSATFDFLGHNAPVVVVKFNNSTFRKNFSNGQDTKAAPAGLANGASKTST
KEQQPYNVIAIGSQDRTITVWTTASARPLFVAKHFFSQSVVDLSWSPDGYSLFACSLDGS
VANFHFEAKELGYRLSDSEMDELKRNRYGDVRGHQSNLAESPAQLLLEQTSAKQSTGKKG
SSIVQPFQAPPKVSADVPNPVPTVQSQKAPEASPEDDKKTAGPTSDDVNKVNRLSSPVKQ
REYRRPDGRKRIIPEAVGFPSNQDNTPNHSQNQAVDFSSLDQRMNGKRPSYGSSSNCNNC
EVRDRFGVTARANITESLVIQKAPTSAGSDGRLSIEHSGSVVPGSLTSCSALSIHVQNNK
DNEDSIPVCLEAKTVERAASDTIGVGGAFSTKESEIKCTRGTETLWSDRISGKVTVLAGN
ANFWAVGCEDGCLQVYTKFGRRAMPAMVMGSAAVFIDVDDCWKLLLVTRRGLMYIWDLYN
RTCILQDSLASLVASPDESSAKGAGTVKVISAKFSRCGSPLVVLASRHAFLYDMSLKCWL
RIADDCFPASNFASSFSSTQGGELGKLQIDIGKFMARKPIWSRVTDDGLQTRSHLETQLA
ASLALKSAQEYRQCLLSYVRFLAREADESRLREVCESFLGPPVGMAGSVPSMDPKNPVWD
PDVLGMKKHELLREDILPSMASNRKVQRLLNEFMDLLSEYEAAEAKANLMDVIPTPQPTA
EASDKVMQPATEASDKVMKLASEANDKVMEPRTEVNDMVTTS
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgattactgagaagccaacctggattcgccacgaggggctgcagatcttctccattgac
atccagcctggcggcctccgcttcgccaccggtggcggcgaccagaaggttcgaatatgg
agcatgaaatctgtagataaggataatgccagtgatgattccagccaaagattgctcgct
acaatgcgtgaccattttggatcagtaaactgtgtgagatgggccaagcatggccgctat
cttgcttcaggatcagatgatcaggttatcctaattcatgagagaaaagctggttccggg
acatctgagtttggtagtggagaacctccagatgtagaaaattggaaggtcattatgacc
ttaagagggcatactgcagatgtggtagatcttagttggtcccctgatgattcaacattg
gctagcggcagcttggataataccgttcacatatggaacatgaccaatggtatttgcacc
gcggtcttgcgagggcattccagcttggtcaaaggggttacctgggatcctattggttct
ttcattgcaagccaatcagatgataaaactgttataatatggcgtacaagtgactggagc
cttgctcacaagacagaaggccattgggccaaatctcttggttcaacattttttagacga
cttgcttggtcaccttgtggccacttcataactacgactcacgggttccagaaacctagg
cattcagcacctgtgcttgaaagaggcgaatggtctgcaacttttgactttctagggcat
aatgcgcctgttgtggtggttaagtttaataactcaacattccgcaagaatttctcaaat
ggtcaagacacaaaggctgcgccagctggattggccaatggagcatcaaagacatcaaca
aaagaacagcaaccatataatgttattgctattggaagtcaagacagaactattactgtt
tggacgacagcgagtgcccgaccattatttgttgctaagcattttttctctcaaagtgtg
gttgatttatcttggagccctgatggttattcactttttgcctgctccttggatggatcg
gtggccaactttcactttgaagcaaaggagcttggatacaggttaagcgactctgaaatg
gatgaattgaagaggaacagatatggtgatgtcagaggacatcaatcaaatctggctgaa
agccctgcacagttgctgctagaacaaacatcagcaaagcaatcaactggcaaaaagggg
tcttccattgtccagccatttcaagcacccccaaaagtttctgcagatgtgcctaaccca
gttcccactgtgcaaagtcagaaagctcctgaagcttcacctgaagatgataagaaaaca
gcaggtcccacttctgatgatgtaaataaagttaaccggttatctagtccagtgaaacag
agagaataccggcgtcctgatggccggaaaagaataatcccagaggcagttggatttcct
tccaaccaggataacacacccaaccattctcagaatcaagccgtggatttttcatctctg
gatcaacgaatgaatggaaaaagaccatcttatggcagcagcagtaactgtaataactgc
gaggttagggatcgctttggtgttacagcaagggcaaacataactgagagtcttgttatt
caaaaagctccaactagtgctggcagtgatggaaggctgagtatagaacactccggatct
gtagttccaggctctttgacctcctgctccgctctttctatccatgtacaaaataataaa
gacaatgaggattctataccagtctgccttgaagcaaagactgtagaacgtgctgcaagt
gatacaattggtgtaggtggtgccttttcaacaaaagaatccgagataaagtgtacaaga
ggtacagaaactctttggtcagatcgtatctctggaaaggttactgtcttggcaggcaat
gcaaatttctgggctgttggttgtgaagatggttgcctgcaggtttacacaaaatttgga
aggagagcaatgccagcaatggtgatgggatctgcagctgtttttatagatgttgatgac
tgctggaagttgcttcttgtcacaaggagaggtttaatgtacatatgggacctctataac
aggacctgcattttgcaggactctttagcttctttggttgcatctccagatgagtcatct
gcaaaaggtgctggtacagtaaaggttatatctgccaaattctcaagatgtggttcaccc
ttagttgtccttgccagccgtcatgcttttctttatgacatgagccttaagtgctggcta
aggattgccgacgattgttttccagcatcaaattttgctagctcatttagttccactcag
ggtggggagctaggcaagttgcagattgatataggcaagttcatggctagaaagcctatt
tggagcagggttacagatgatgggttgcagacacgctcccatttggagacccagctggca
gcttctttggctttgaagtcagcacaggagtatcgccaatgcctcctgtcctatgtccgg
tttttagctagagaagcagatgaatctcgtctacgtgaagtttgtgagagcttcctaggt
cctccggtgggcatggctggttctgtgccctctatggatcccaaaaaccctgtgtgggat
cctgatgttcttggaatgaagaagcacgaacttcttagggaagatatacttccgtccatg
gcatcgaaccggaaagtccagcggctgctcaacgagttcatggacctcctgtcagaatat
gaagctgccgaggccaaagctaacctgatggatgtcataccgacaccacagcccacagca
gaagccagtgacaaggtgatgcagcccgcaacagaagccagtgacaaggtgatgaagctc
gcatcagaagcaaatgacaaggtgatggagcccagaacagaagttaatgacatggtgaca
acctcgtag
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