Panicum hallii (Hall's panicgrass): 112894421
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Entry
112894421 CDS
T07366
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 7 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112894421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112894421
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112894421
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112894421
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
112894421
NCBI-ProteinID:
XP_025817913
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All DBs
Position
5:53990316..53996534
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AA seq
314 aa
AA seq
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MEEEEECEYESETESLRSEERRQKRRVEMGKEAVGGGGGGGNGDGGGEEAAGEAGRPDRE
ILVKMDSQVLDCTICFEPLRPPIYQCEVGHAVCHVCRGKLGNTCPICCRGIGFSRCFALE
DVVDTVKVPCANTNYGCKQFIIYYQKEKHEKTCLHAPCFCPEDGCSFKGSTGSLLLHFVT
EHKWSPTYFHYDKAQWISIPRHCQFTLLVGEEDLSMFLVVNTFVHVGNALTMISIRPHEA
SRSCYSSEISVHDGESYKGRYVLQMDPHVGGSSLHDRAQLGRFFLMVPPELVDESTDELT
INIRIEKIQCDVHH
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaagaggagtgcgagtacgagtcagaaacggagtcgctccgctccgaggaa
cggcgccaaaaacggcgagtggagatggggaaggaggcggtaggaggagggggtggcggt
ggaaatggagacggaggaggagaagaagcggcgggtgaagcggggaggccggaccgcgag
atcttggtcaagatggactcccaagttcttgactgcaccatctgcttcgagcccctccgg
ccaccaatctaccagtgcgaggttggacatgctgtatgtcatgtatgccgtggaaagctt
ggcaatacatgcccgatctgctgcagaggaattggcttctcccgctgctttgcgcttgag
gatgtggttgacaccgtcaaagtgccatgtgcaaacacgaattatggatgcaagcagttc
atcatatactaccagaaagagaagcatgagaagacatgcctgcacgctccatgcttctgc
ccagaggatggctgctcattcaaaggatcaacaggatcgctcctcttgcactttgtcacc
gagcacaaatggtcacccacatacttccattacgacaaggcccagtggatctccatccca
cggcactgccagttcacactcttggttggagaagaggacctgtccatgttcctcgtggtg
aacactttcgtccacgtgggcaatgctctcaccatgatctccatcaggccccatgaagcc
tccaggtcatgctattcgtccgagatatccgtccacgatggtgaatcttacaaaggaagg
tatgtgcttcagatggatcctcatgtagggggcagctcgctgcatgaccgggctcagttg
ggaaggttcttcctgatggtgcctcctgaattggtcgatgaatcaaccgacgaactcacc
atcaacattcgcatcgagaagatccagtgtgacgtgcatcattga
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