Panicum hallii (Hall's panicgrass): 112894504
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Entry
112894504 CDS
T07366
Name
(RefSeq) alpha-amylase 3, chloroplastic isoform X1
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00500
Starch and sucrose metabolism
phai01100
Metabolic pathways
phai01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
112894504
Enzymes [BR:
phai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
112894504
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Gene cluster
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Motif
Pfam:
Ig_N_CWD1
Alpha-amyl_C2
Alpha-amylase
Glyco_hydro_70
Motif
Other DBs
NCBI-GeneID:
112894504
NCBI-ProteinID:
XP_025818024
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Position
5:complement(11016681..11027732)
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AA seq
881 aa
AA seq
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MSVGSGCIPAIPGVAPPPRAGLLGGAFLQVAAARPRAGRCRATQQGRVRLGGRVVARAGA
AETPVAGADEDAGAVFSEKFPLRRCQTVEGKAWVRVDAEPDGDGKCKVVVGCDVAGKWIL
HWGVSYDGEHESEWDQPPSEMRPPGSVPIKDYAIETPLEILPNSEGRYEVQIKFDMDTPV
AAINFVLKEEETGAWFQHKGRDFRIPLSGSSDGGVPFGATEDIGVWPGDLGQLKKHEGSN
AQPQETIPGGKGLSGKHISGFYQEFQIIKSEYTHNFVTVTVKRDNETHKRRVEFDTDIPG
EVIIHWGVCRDNNMTWEIPPEPHPPTTRIFRQKALQTLLQAKADGRGNYLSFLLDAEYSG
LFFVLKLDEYTWLRNLDNGSDFFISLTRMEQRGSTQDPGKVEPQKVDKPSQPDGIISDIR
NLVVGLSSRRGQRAKNKVLQEDILQEIERLAAEAYSIFRSPTIDSVEASVDLDDQSIVKP
ACSGTGSGFEILCQGFNWESHKSGKWYVELGKKAKELSSLGFTIVWSPPPTDSVSPEGYM
PRDLYNLNSRYGTMDELKELVKIFHEADIKVLGDAVLNHRCAQFQNNNGVWNIFGGRMNW
DDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQEFVRNDLKEWLCWMRKEVGYDGWRLD
FVRGFWGGYVKDYLEASEPYFAVGEYWDSLSYTYGEMDYNQDAHRQRIVDWINATNGTAG
AFDVTTKGILHAALERSEYWRLSDEKGKPPGVLGWWPSRAVTFIENHDTGSTQGHWRFPY
GMELQGYAYILTHPGTPAVFYDHIFSHLQPEIAKFINIRQRQKIHCRSKIKILKAERSLY
AAEIDEKLIMKIGSEHFEPSGPQNWIVAAEGQEYKIWEVSS
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggggagcgggtgcattccggcgatcccgggcgtggccccgccgccgagggcc
gggctgctcgggggcgccttcctgcaggtggccgcggcgcggccgcgggccgggcggtgc
cgcgccacgcagcaagggcgcgtgaggctcggcggccgcgtcgtggcccgggctggcgcg
gccgagactccggtggctggcgccgacgaggacgccggagcggtgttctccgagaagttc
cccctgcgccgatgtcaaacggtggaagggaaggcgtgggtgagggtggacgcggagccg
gatggggacggcaagtgcaaggtcgtggtgggatgcgatgtggcggggaagtggatactg
cactggggtgtctcttacgacggtgagcatgagagcgagtgggatcagcctccttcagaa
atgagaccacctggttctgttccaatcaaggactatgccattgaaacaccattggagatt
ttacctaattcggagggccggtatgaagtgcaaatcaaatttgatatggacactccagtt
gcagccatcaattttgtcctcaaggaagaggaaacaggtgcatggtttcagcataagggc
agggatttcagaatacccttaagtggatcctccgacggtggagttccatttggagcgacc
gaagatattggtgtatggccaggagatttggggcagttgaagaaacatgaaggatctaat
gctcagccacaagaaactatacctgggggtaaaggtttaagtggaaaacatatttcaggg
ttctaccaggaattccaaattataaaatcagagtacactcataactttgtaactgttact
gtgaagagggataatgaaacacataaaaggcgtgtggaatttgacactgatattcctgga
gaagttatcattcattggggagtttgcagagacaataacatgacatgggagatcccgcca
gaaccacatccaccgacaacgagaatcttccgacagaaagctcttcagaccttgctacag
gcaaaagctgatggaagaggcaattatttatcattcttactagatgcagagtattctggt
ctgttttttgtgctcaaacttgatgagtatacttggttgagaaatctggacaatggatcc
gatttcttcatttctcttacaagaatggaacaacgtggaagcacccaagatcctggtaag
gttgagccacaaaaagttgataagccttcacaacctgatggtataatcagtgatataaga
aatctggtggttggcctatcgtctagaagaggtcagagagctaagaataaagtactgcaa
gaggatatcctgcaagaaattgaaaggctagcagcagaagcttatagcatttttaggagc
cctactattgattccgttgaggcgtctgtagatctcgatgatcaatcaatcgtaaagcca
gcttgttctggcactggatctggcttcgaaatattgtgccaaggatttaattgggaatct
cataagtcagggaaatggtatgtggaacttggtaaaaaggccaaggagttgtcatccctt
ggttttaccattgtttggtcaccaccacctactgattctgtgtcacctgaaggatacatg
ccaagggatttatataatctgaactccagatatgggaccatggatgagttgaaggagctt
gtgaagattttccatgaagctgacatcaaggttcttggtgatgctgttctaaatcacagg
tgtgctcagtttcagaataacaatggtgtctggaatatttttggtggccgtatgaactgg
gatgatcgagcggttgtagcagatgatccacatttccagggaagaggaaacaagagtagt
ggagataacttccatgcagcaccaaacattgatcactcccaggagtttgtgaggaatgat
cttaaggaatggctttgctggatgagaaaggaagtaggatatgatggatggagacttgac
tttgttcgtggtttttggggtggatatgtcaaagattatttggaagcaagtgagccatac
tttgcagtaggagagtactgggactccctcagttacacttatggtgaaatggactacaat
caagatgcccacaggcagagaattgttgattggataaatgctacaaatggaactgccggt
gcatttgatgtcactaccaaaggaatacttcatgcggcacttgaaagatctgagtattgg
cgcttgtctgatgaaaaaggaaaaccccctggagtattgggttggtggccttcccgagct
gtcacattcatagagaatcatgatactggctctactcagggtcattggagattcccctat
ggtatggagttgcaaggatatgcctacatcctgacgcaccctggcactccagcagtcttc
tatgatcacattttttcgcacttacaaccagagatcgccaaatttatcaacatccgacaa
cgtcaaaagattcattgccgcagcaagatcaagatactcaaggcagaaaggagtttatat
gctgctgaaatcgatgagaagttaataatgaaaataggctcagaacattttgagccaagc
ggtccccagaactggattgtcgctgctgagggtcaagaatacaaaatctgggaagtgtct
tcatag
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