Panicum hallii (Hall's panicgrass): 112894566
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Entry
112894566 CDS
T07366
Name
(RefSeq) transcription initiation factor TFIID subunit 15b
KO
K13098
RNA-binding protein FUS
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03015
mRNA surveillance pathway
phai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112894566
09122 Translation
03015 mRNA surveillance pathway
112894566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phai03041
]
112894566
Spliceosome [BR:
phai03041
]
Complex A
Other components
Complex A specific factors
112894566
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
112894566
NCBI-ProteinID:
XP_025818102
LinkDB
All DBs
Position
5:55709398..55713256
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AA seq
492 aa
AA seq
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MSGSYGSDDYRGGGGGGGGYGGRGGGGGGRGRGGGGGGYGGGGGGGYGGGGGGGYGSGGG
GFGVGGGRGGGGGFGGGGRGGGGRGGGGRGGGREGGREGDWVCPDASCGNVNFARRTECN
KCGTPCPSGAGGGGGGGGYNRSGGGGGGYNRGGGDYGSGGGGGFDRDGAGGGGRGGYNRS
GGNDRGFDDHRGGRGGSYGGRDQENQRGSEGGYNAGGYGQAPPQGPPSFGGPAGDYAAPP
SSYGGNNAYGSDSAVPPPNSYSGGPASYPPSYGAPPPNQYGGGAPGGQGGLPPTYDGGYG
GRSMPGGGGSGGAPPPYHGGGGGGGGGYTGGAASEPAAKVKQCDANCDETCDNARIYISN
LPPDVTVEELQELFGGIGQVGRIKQKRGYKDQWPWNIKIYTDDSGKAKGDACLAYEDPSA
AHSAGGFYNNYDMRGYKISVVMAEKSAPRAPSYGHGGGRGGGYGGGRRDNYRDGGGHGPN
RNQGGGSRSRPY
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggtcttacggatccgacgactaccgcggcggcggcggtggcggcggcggatac
ggcggccgaggtggcggtggaggcggccgcgggcgcggaggcggtggaggagggtatgga
ggtgggggtgggggaggttatggaggtggtggtggaggtggatatggaagtggtggtgga
ggattcggcgtcgggggcggtagaggcggaggcggcggcttcggtggcggagggcgaggt
ggaggtggccgaggcggtggcggccgcgggggaggacgcgagggaggacgcgagggcgac
tgggtttgccctgatgcgagctgtggcaatgtgaactttgcaagaaggactgagtgcaac
aagtgtggaacaccttgcccaagtggagctggaggtggaggtggtggcggcggttacaat
agatctggtggaggtggtgggggctacaaccgtggtggtggtgattacgggtctggagga
ggaggtggctttgacagagatggtgctggtggtgggggaagaggaggatacaaccgaagt
ggtggtaatgaccgtggttttgatgatcaccgtggtggtagaggtggcagttatggggga
cgagaccaggaaaaccaaaggggcagtgaaggtggctacaatgctggtggttatggacaa
gctcctccgcaagggcctccttccttcggtggacccgccggtgactacgcagcgcctccg
agctcctatggaggcaacaatgcttatggttcagactctgcagtgccacctcctaatagc
tatagcggtggcccagcctcatacccaccaagctatggtgcccctcctccaaaccaatat
ggtggtggtgccccaggggggcaagggggtctgcctcctacatatgatggtggctatggt
ggtcgatccatgccagggggtgggggttctggtggtgcacctccaccttatcatggtggc
ggtggcggtggaggcggtggttatactggtggtgctgcttctgagccagcggcaaaggtt
aagcagtgtgatgcaaactgtgatgagacatgtgacaatgcaagaatttacatctcaaat
ttgccccctgatgtcactgttgaagaattacaggagctatttggaggaatcggccaggtt
ggaaggatcaagcaaaaacgtggctataaagatcagtggccctggaacataaaaatctat
actgatgactccggaaaagccaaaggagatgcttgccttgcttatgaagatccttctgct
gctcattcagctggtggattctacaacaattatgacatgagaggctataaaatcagcgtt
gtgatggctgagaaatcagcacccagagcaccctcttatggtcatggtggtggccgtggt
ggtggctatggtggcggtcgcagggacaattacagagatggtggtgggcatggacccaat
agaaaccagggtggtggttcgcgttcacgaccttactga
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