KEGG   Panicum hallii (Hall's panicgrass): 112894967
Entry
112894967         CDS       T07366                                 
Name
(RefSeq) protein RAE1-like
  KO
K14298  mRNA export factor
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    112894967
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phai03019]
    112894967
   03036 Chromosome and associated proteins [BR:phai03036]
    112894967
Messenger RNA biogenesis [BR:phai03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     112894967
Chromosome and associated proteins [BR:phai03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    112894967
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_RIG_2nd WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin Beta-prop_DCAF12 Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_SCAP Beta-prop_WDR41
Other DBs
NCBI-GeneID: 112894967
NCBI-ProteinID: XP_025818608
LinkDB
Position
5:complement(14513304..14519028)
AA seq 345 aa
MASFSPAGAGAANHNPNKSVEVTPAPEDSVSSLSFSSKANHLVATSWDKQVRCWEVLPGG
VCQAKASISHDQPVLCSAWKDDGMTVFSGGCDKQIKMWPLLSGGQPTTLSGHEAPVKELA
WVPQMNLLVSGSWDKTLRYWDIRQPQPVHVQQLPERCYALSLCYPLMVVGTADRNVIVFN
LQNPQAEFKRIVSPLKLQTRCLAAFPDQQGFLVGSIEGRVGVHHVDDSQQSKNFTFKCHR
DGNDIFSVNSLNFHPVHGTFATTGSDGGFNFWDKDSKQRLKAFSKCPAPITCSTFNQDGS
IFAYAVCYDWSRGAEKHNPSTAKTNIFIHSVQESDVKGKPRAGKK
NT seq 1038 nt   +upstreamnt  +downstreamnt
atggcgagcttcagccccgccggcgccggcgccgccaaccataaccctaacaaatccgtc
gaggtcactccggcgcccgaagactcggtctccagtctcagcttcagctccaaggcgaac
catctcgtagccacctcatgggataagcaggttcggtgctgggaggtcctgcctggtggg
gtgtgccaagcgaaggcctcgatttcccacgatcagccggtgctgtgctcggcatggaag
gatgatgggatgactgttttctcaggaggatgtgataagcagattaaaatgtggccgctg
ctgtctggtgggcagcccacaaccttatcagggcatgaggcgcctgtcaaagaacttgct
tgggtgccacagatgaaccttcttgtcagtggaagctgggacaagactctgaggtactgg
gacattaggcaacctcaaccagtgcatgttcagcaacttcctgagcgttgctatgctcta
tcgctttgttatcctctcatggtggttggcactgctgatcgcaacgtaatagtcttcaat
ctgcagaatccacaggctgaattcaagagaattgtatcacctttgaagctacagacaagg
tgtcttgccgcatttcctgatcaacaagggtttttggttggatctatagaaggaagagtt
ggtgttcatcatgtggatgactctcagcaaagcaaaaactttacattcaaatgtcaccgc
gatggcaatgatatattctctgttaactctctgaacttccatcctgtgcacggcacattt
gcaactacaggctctgatggaggtttcaatttttgggataaggacagtaagcaaaggctg
aaggcttttagtaagtgtccagcaccaatcacatgcagtacattcaaccaggacggctct
atatttgcttatgcggtatgttacgattggagcaggggtgctgagaagcataatccttct
actgcaaagacaaatatctttatacatagcgtacaggaatctgatgtgaaaggaaagccc
cgtgctgggaagaagtag

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