Panicum hallii (Hall's panicgrass): 112894967
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Entry
112894967 CDS
T07366
Name
(RefSeq) protein RAE1-like
KO
K14298
mRNA export factor
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112894967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112894967
03036 Chromosome and associated proteins [BR:
phai03036
]
112894967
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112894967
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
112894967
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_RIG_2nd
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_WDR41
Motif
Other DBs
NCBI-GeneID:
112894967
NCBI-ProteinID:
XP_025818608
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Position
5:complement(14513304..14519028)
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AA seq
345 aa
AA seq
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MASFSPAGAGAANHNPNKSVEVTPAPEDSVSSLSFSSKANHLVATSWDKQVRCWEVLPGG
VCQAKASISHDQPVLCSAWKDDGMTVFSGGCDKQIKMWPLLSGGQPTTLSGHEAPVKELA
WVPQMNLLVSGSWDKTLRYWDIRQPQPVHVQQLPERCYALSLCYPLMVVGTADRNVIVFN
LQNPQAEFKRIVSPLKLQTRCLAAFPDQQGFLVGSIEGRVGVHHVDDSQQSKNFTFKCHR
DGNDIFSVNSLNFHPVHGTFATTGSDGGFNFWDKDSKQRLKAFSKCPAPITCSTFNQDGS
IFAYAVCYDWSRGAEKHNPSTAKTNIFIHSVQESDVKGKPRAGKK
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcttcagccccgccggcgccggcgccgccaaccataaccctaacaaatccgtc
gaggtcactccggcgcccgaagactcggtctccagtctcagcttcagctccaaggcgaac
catctcgtagccacctcatgggataagcaggttcggtgctgggaggtcctgcctggtggg
gtgtgccaagcgaaggcctcgatttcccacgatcagccggtgctgtgctcggcatggaag
gatgatgggatgactgttttctcaggaggatgtgataagcagattaaaatgtggccgctg
ctgtctggtgggcagcccacaaccttatcagggcatgaggcgcctgtcaaagaacttgct
tgggtgccacagatgaaccttcttgtcagtggaagctgggacaagactctgaggtactgg
gacattaggcaacctcaaccagtgcatgttcagcaacttcctgagcgttgctatgctcta
tcgctttgttatcctctcatggtggttggcactgctgatcgcaacgtaatagtcttcaat
ctgcagaatccacaggctgaattcaagagaattgtatcacctttgaagctacagacaagg
tgtcttgccgcatttcctgatcaacaagggtttttggttggatctatagaaggaagagtt
ggtgttcatcatgtggatgactctcagcaaagcaaaaactttacattcaaatgtcaccgc
gatggcaatgatatattctctgttaactctctgaacttccatcctgtgcacggcacattt
gcaactacaggctctgatggaggtttcaatttttgggataaggacagtaagcaaaggctg
aaggcttttagtaagtgtccagcaccaatcacatgcagtacattcaaccaggacggctct
atatttgcttatgcggtatgttacgattggagcaggggtgctgagaagcataatccttct
actgcaaagacaaatatctttatacatagcgtacaggaatctgatgtgaaaggaaagccc
cgtgctgggaagaagtag
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integrated database retrieval system