Panicum hallii (Hall's panicgrass): 112895134
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Entry
112895134 CDS
T07366
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112895134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112895134
Membrane trafficking [BR:
phai04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
112895134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
BIG2_C
Sec7-like_HDS
DCB
Mon2_C
Phage_TAC_15
Importin_rep_4
Motif
Other DBs
NCBI-GeneID:
112895134
NCBI-ProteinID:
XP_025818800
LinkDB
All DBs
Position
1:complement(4823072..4831169)
Genome browser
AA seq
1700 aa
AA seq
DB search
MATPTAPLGGASPTGRVLGPALDRIIKNAAWRKHSALVAAAKAALDLLSSSPAYPSPDPT
SPKSSPLLGLPPAAADAALHALLLALESASPKVADPALDCVAKLLYHRLLFGDLGCAGGG
DDASSPSSRLLNAVLACGALSDDAMELATLRVVVAAARCPTVAIRGEGLGQVLKTCYNIY
LSSSSGANQLCAKLALAQVLVIVFARVEVDTMDVRVRTVSITDMMDVSDRSLNDSSIVQV
AQGFINEAMEGSDVPEPGSPVEPIEVDGKEDDGMSKIREDGLALFKNLCKLSMKFSTPDN
PEDQMLLRGKVLSLELLKMVVDNAGPFWRTNEKYLGAIKQYLCLSLLKNSALSAMSIFQL
LCSIFVGLLSRFRSGLKEEIGIFFPMLVLRVLENVHQPSFLQKMTVLNLLEKICKESQVL
IDIFVNYDCDVDAPNIFERAVNGLLKTALGVPPGSTTTLTTAQDQTFRIESVKCLATIIK
SMGSWMDQQLRIGEFSPKVSEASLSSVSSMSSIDIPNILIGEDGSAIDYELQSDSGSPDV
SGAPSLEQRRAFKIELQKGISLFNRKPSKGIDFLIKSKKIGHSPEDVASFLRNTAGLNAT
MIGDYLGERDEFPIKVMHAYVDALNLEGMDFGEAIRYYLRGFRLPGEAQKIDRIMEKFAE
RYCKCNPDSFTSADTAYVLAYSVIMLNTDAHNNMVKDKMSKIDFIRNNRGIDDGKDLPEA
YLGTLYDQIVKNEIKMSADSSVPQNKQTSTVMKLLGLDNIMSFVNWKQVEDRADGANDLL
IKNIQEKFKLKSVKSESVFSVITDTTILRFMMEVCWAPMMAAFSVTLDQSDDKAATLQCL
QGFRSAVHVTSVMCMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGDYL
QEAWEHILTCLSRFEHLHLLGEGAPTDASFLTVPLVDSEEKTQKSASTLSKRTNALQNPA
VMAAVRGGSYDSTTAKNKASPLVTPEQINNFISNINLLDQIGIFELNHIFAHSPRLNSDA
IVAFVKALCKVSMTELQSPTDPRIFCLTKIVEIAHYNMNRIRLVWSRIWKVLSDFFVSVG
LSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLQPFAVVMQKSSASEVRELVVRC
VSQMVLSRVNNIKSGWKSVFTVFTAAAADDRKSIVLLAFETMEKIVRDYFPYITETESTT
FTDCVKCLITFTSSKFSSDASLNAIAFLRFCAVKLAEEGFICHDKDADQHPNNLDSSDGN
ITVHKDDHVYFWVPLLAGLARLTTDSRPTIRKGAVEVLFDILKDHGHLFSQSFWANIFES
VIYPLFSSESFAPNGQISSVNSTEDDSWNFETKMVALKCLADLYITFFEVMRPELSRVTS
VITNFIRSPYKQSASTCISVFQRLTEGLACKLSNDEWEKILLCFKESAAQTFVVFDKIVK
MMKDIEIPDRNESYSEAEQYSDHDVYNDDEEEANMETASYAIVRMKNHMALQLLIVQGIV
KLYEMHRSFLCAEHIGIMLQMLSAISSHASEVNSESKLHIKLHKACSLLEVSEPAVIHFE
SESYQSYLKLLQAILHDNPSLSADMNVNVESQIMLVCDKILRMYLTCAGHEPSNDASGRD
PALHRLPLGTAKKEELEARTSLVLNVMRLLGSLEKNCFRRNLPMFFPLLANLIRCQHSSG
EVQVALYEIFQSSIGPIISA
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccccacggcgccattaggcggcgcgtccccgacgggccgcgtcctgggcccg
gcgctggaccggatcatcaaaaacgccgcgtggcggaagcactcggcgctcgtggcagcg
gcgaaggccgcgctcgacctcctctcctcatcgccggcctacccgtcgccggaccctacc
tcgccgaaatcctcgccgctgctcggcctgccccccgccgccgccgacgcggccctccac
gcgctgctgctcgcgctcgagtccgcttcgcccaaggtcgccgaccccgcgctcgattgc
gtcgccaagctcctctaccaccgcctcctcttcggcgacctcggttgcgccggcggcggc
gacgatgcctcttccccctcctcccgcctcctcaacgccgtcctcgcgtgtggcgctctc
tccgatgacgcaatggagctcgccaccctccgcgtcgttgtcgctgctgcgcggtgcccc
accgtcgccatccgcggggagggcctcggccaggtcctcaagacctgctacaacatatac
ctcagcagcagcagcggcgccaatcagctctgcgcgaagcttgcgctcgctcaggtgctg
gtcattgtgtttgcgcgcgtggaggtggacaccatggacgtgcgcgtgcggacggtgtcg
atcacagatatgatggatgtgtctgaccgcagcctgaacgactccagcatcgtgcaggtg
gctcaggggtttataaatgaggctatggagggcagtgatgtcccagagccagggtcacct
gtggagccaattgaagtggacggaaaggaggatgatgggatgagcaagatcagggaggat
gggctagcgctcttcaagaacctgtgcaagttgtcaatgaagttctcgacgccagataac
cctgaggatcaaatgttgctgcggggcaaggtgttgtctcttgagttgctgaaaatggtt
gttgacaatgccggccctttctggcgaacaaacgaaaagtaccttggagcaatcaagcaa
tatctttgtttgtccttgttgaagaacagtgctttgtccgcaatgagtatttttcagctg
ttgtgctccatatttgtgggcttgctatcaaggtttagatctgggctgaaagaggaaatt
ggaatattttttccaatgcttgtcctaagggttcttgagaatgtccatcaacctagcttt
ctgcaaaaaatgacagttctaaacttgttggagaagatctgtaaagaatctcaggttctt
atcgatatctttgtgaactacgattgcgatgtagatgcaccaaatatttttgaaagggct
gtcaatggacttctgaaaactgctttaggtgttcctccaggatctacaacaacattaaca
acagcccaagaccaaacatttcggattgagtcagtcaagtgccttgcaaccataatcaaa
tcaatgggttcatggatggatcaacagcttagaattggtgaattttcaccaaaagtttct
gaagcttctttaagttcagtgagttcaatgagttcaatagacattcctaacatccttatt
ggagaagatgggagtgcaattgattatgaactgcaatctgactctggtagcccagacgta
tctggtgctccctcccttgagcaacgtcgtgcttttaaaatagaacttcagaaaggaatt
tccttgtttaacagaaaaccttccaagggtattgattttcttattaaaagcaagaagata
gggcattcaccagaagatgttgcttctttcttgagaaatactgctggtttaaatgcgaca
atgattggagactatttgggcgaaagagatgaattccctatcaaagttatgcatgcatat
gttgatgcactgaacttggaaggtatggactttggtgaagccattcggtattatttgcga
ggcttcaggttgcctggggaagcacagaaaattgataggatcatggaaaagtttgctgaa
cgatactgcaaatgcaatccagactcctttaccagtgcagataccgcatatgttcttgca
tattctgtaatcatgctcaacactgatgctcacaataatatggtcaaggataagatgtcc
aagattgatttcatacgcaataaccgaggcatagatgatggaaaggacttgcctgaagct
tatctgggtacactatatgaccaaattgtcaaaaatgagatcaaaatgagtgctgattca
tcagtcccacaaaacaagcaaactagtactgtgatgaagctattaggtttggacaatatt
atgagctttgttaactggaaacaggttgaggatagggcagatggagcaaatgacttgctc
atcaagaacatacaagagaaatttaaattaaagagtgtaaagtcagagtctgtgttttca
gttattactgacacgactattttaagattcatgatggaggtttgttgggccccaatgatg
gccgcattcagtgtgacacttgaccagagtgatgataaggctgccacgttgcagtgtttg
cagggattcagatctgctgtgcatgtaacctctgttatgtgcatgcagacacagagagat
gcctttgtgacatctgtagccaaattcacatatctccattgtgccgctgacatgaaacaa
aagaatgtggatgctgtgaaggctataatatccattgcgatcgaagatggtgattatttg
caggaagcttgggagcatatattaacatgcctttctcggtttgagcatttacatcttctt
ggagagggagcacctactgatgcttcatttctcacagtaccactggttgattcagaagaa
aaaacacaaaagtctgcctctacgttgtcaaagagaactaatgcacttcagaatccagct
gtaatggctgctgttagagggggttcttatgatagcacaacagcaaaaaacaaagcatcg
ccattggttactcctgaacagattaataatttcatatcaaacataaacctgctagaccag
attggcatttttgagctaaatcacatatttgctcatagcccaagactaaatagtgatgct
attgttgcttttgtgaaagctctttgcaaagtttcaatgacggagttgcagtctcctaca
gaccctcgtatcttctgcctaacaaagattgttgagattgcgcattacaatatgaaccgc
atacgtttggtttggtcccgtatttggaaagttctgtcagacttttttgtttctgttggg
ctctcagagaatctttcagtcgcaatatttgttatggactctttgaggcagcttgccatg
aagtttctggaaagagaggaactggcaaattataatttccagaatgaattcctgcaacct
tttgcggttgttatgcagaagagcagtgcttcagaagtacgcgaacttgtagttcgatgt
gtctcccaaatggttctgagtcgtgtcaacaatataaaatctggatggaaaagtgttttt
acggtttttactgcagctgctgctgatgatcgaaaaagtattgttctgttggcatttgaa
actatggaaaagattgttagggactatttcccttacattactgaaactgaaagcacaaca
tttactgattgtgttaaatgcctcattacattcacaagtagtaaatttagcagtgatgcc
agtctcaatgctattgcatttcttcggttctgtgctgtcaaacttgccgaggaaggattt
atttgccatgacaaggatgctgaccagcatccaaataatttagattcttcagatgggaac
atcacagtgcataaggatgatcatgtttacttctgggttcctttgcttgctggtcttgct
agattgacaactgactcgagaccaactatcagaaaaggtgctgtggaagtgctctttgac
attttgaaagatcatgggcacctcttttctcagtccttctgggctaatatcttcgaatca
gttatctatcccctatttagtagtgaaagctttgcaccaaatggtcagatttcaagtgta
aatagtactgaggatgattcttggaatttcgaaactaaaatggtggctctaaaatgttta
gcagatttgtatattaccttttttgaagtgatgcggccagaactttctagagttacttct
gttattacaaatttcatcagaagcccatataaacaatcagctagcacatgcatatcagtt
ttccagcgtttaacagaaggacttgcatgcaagctctccaatgatgagtgggagaagatt
ttgctgtgtttcaaagaatcagcagcacagacatttgttgtgttcgacaaaatagttaaa
atgatgaaagacattgaaattccagatagaaatgaatcttactctgaagctgaacaatat
tcagatcatgacgtatacaatgatgatgaagaggaagctaatatggaaacagcatcttat
gctattgtcagaatgaagaatcatatggctttgcaactcttaattgttcagggcatcgtt
aaattgtatgagatgcacaggagctttctatgcgctgagcatataggcataatgttgcag
atgctatctgccatttcatctcatgcaagtgaagtgaactctgaatctaagttgcacata
aaactacataaagcatgttcccttttggaggtatctgagccagcggtcatccatttcgag
agcgaatcctaccagagctatctgaagcttctgcaagctattcttcatgacaacccatct
ttgtcagcagatatgaatgtgaatgtggagtcacaaattatgcttgtctgtgacaaaata
ttgcgaatgtatctgacctgtgcaggacatgaaccatctaatgatgcttctggtagagat
ccagctttacacaggttgcctctgggtactgctaaaaaggaggaactggaggctagaact
tcgttggtccttaatgtaatgcggttattgggcagtttagagaagaattgctttaggagg
aacttgcccatgtttttccccttattagctaatcttatccgctgccagcatagctctgga
gaagttcaagttgcactgtatgaaatattccaatcatcaataggccccataatatcagca
tag
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integrated database retrieval system
