Panicum hallii (Hall's panicgrass): 112895172
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Entry
112895172 CDS
T07366
Name
(RefSeq) ATP-dependent helicase BRM isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112895172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phai03021
]
112895172
03036 Chromosome and associated proteins [BR:
phai03036
]
112895172
Transcription machinery [BR:
phai03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112895172
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
112895172
Chromatin remodeling factors
BAF complex
112895172
PBAF complex
112895172
GBAF(ncBAF) complex
112895172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
QLQ
Bromodomain
AAA_14
Motif
Other DBs
NCBI-GeneID:
112895172
NCBI-ProteinID:
XP_025818864
LinkDB
All DBs
Position
1:complement(765408..775968)
Genome browser
AA seq
2199 aa
AA seq
DB search
MQPSGGPSGSSRSSPATSPRPEQPQPGTPASAQQQSQQQQLGFRSQGMMHHHEQQQAYQS
GAPPGMMGPGGSGSFPQSSSAMPPFQGQRNLPLSGGPQGMVGGQMHNQVAMQQQYLKLAM
QQQQQQQKVAQGMLLQQQAKMNMPGSSSRDQDMVNNPAKMQEFMALQMFKRQAEHIQQSE
KQKEQGQPSSNEQRTGDMRPPMPPQGVPGQQLPSVGMIRPMQPMQGQVGMGSAGGGPLTP
LQFQAIQAWAKENNFDLSNPANMSAISQLLPIWQSSRMAAMQKQNEASMAAQQQATSSQM
NSDAPGHGNVASQGAPLKARQPIPPSSVSGGEEAKIVNSSNLQLQQQLSAHNRDGSNAVR
PPMTVGNGAQTMHIPQSSGHVNKVPEQSNPKNVLANSEAVQMQHARQMQQLNQAAAPTAT
PGETGGSQAPTPSARPQTGQTGFTKNQLHVLKAQILAFRRLKRGDRTLPPEVLELIVTGR
PPDSQGQQISGPQATPNRERPGVSNVDEHGRQMETGDKAPEKQALLKGPCLPKVEVSASE
DKASPASGPGPMQVMKASPKESLKIGPVSVPEHSNNTVIKSEQDLERGIQRTPGRSDYNA
ERGKSLPAESDSVDAEQTKRAASTSSAPVPRDVPRKYHGPLFDFPSFTRRHDSLGPANYN
SNLSLGYDVKDLLAQEGMIVLGKKREDNLKKISGLLAINLERKRIRPDLVLRLQIEEKKL
KLLEHQARLRDEVEHEQQEIMAMPDRIYRKFVRQCERQRFELARQVQQMQKASREKQLKS
IFQWRKKLLEAHWAIRDARITRNRGVAKYHERMLREFSKRKDDDRNKRMEALKNNDVERY
RQILLEQQTSVPGDAAQRYNVLSSFLTQTEEYLYKLGGKITAAKSQQQVEEAANAAAAAA
RAQGLSEEEVKAAAQCAGQEVMIRNTFSEMNAPRDNTSVNKYYNLAHAVSESVTKQPSLL
RAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLII
VPNAVLVNWKSELLNWLPSASCIFYVGAKDQRQKLFSQEVMAMKFNVLVTTYEFVMFDRS
KLSRVDWKYIIIDEAQRMKDRDSVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLL
PEVFDSSKAFQDWFSKPFQRDGQTHSEEEDDWLETEKKVIIIHRLHQILEPFMLRRRVED
VEGSLPRKDSIVLRCRMSAIQGAIYDWIKSTGTIRVDPEDEKQRAQRNPMYQFKTYKNLN
NKCMELRKVCNHPLLSYPFLNHGKDFMIRSCGKLWNLDRILIKLHRAGHRVLLFSTMTKL
LDIMEDYLQWRRLVYRRIDGTTSLEDRESAIVDFNRPNSDCFIFLLSIRAAGRGLNLQSA
DTVVIYDPDPNPQNEEQAVARAHRIGQTREVKVIYMEAVVDNISSYHKEDELRNGGSGDL
EDDLAGKDRYMGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRTTLETLLHDEE
RYQETVHDVPSLQEVNRMIARTEREVELFDQMDEDFDWTGDMMKHHQVPKWLRVSSTEVD
AVVASLSKKPSRNMSSGGIALDTNDTPEKRRGRPKGTGKYSIYREIDDEDLEESDEDSEE
RNITTPLPDEGEIGEFEDEEDNDDSVPDNKDESEEEEPIHDGRYNFTDGLGSRKANRMEE
AGSTGSSSGSRRLPPPAPSSSSKKLRSLSALDARPGSLSRRTPDDLEEGEIAMSGDSHMD
LQQSGSWNHERDDGEDEQVLQPKIKRKRSIRVRPRPNAEKQEDRSGGEGVFPQRGTHLTF
QGDCDYNSQFKSDLGAHPFADPAARQQDAVHPIVKQKRNMPSKKVSPASRTGKLTYLSGS
GEGSAERSKENWSSKAIDSASPEYRGTKMSDSMQRKCKNVISKLWRRIDKEGHQIIPNIS
SWWRRNENSSFRGPAGSTLDLQKIEQRVDGFEYSAVTEFIADMQQMLKSVVQHFSYRHEV
RIEAETLHNLFFNIMKIAFPDSDFSEAKNAMSFSNPGGAASGVAGQSTKHAALGHKRRAS
TSEAEQHGSGHSRHNQPSEVPSRPHSSRSDRDSRHSGSGSRDQLPDGAGLLHPSDMFIVK
KKRQERPRNSIGSPSSSGRAGPLSPTNPGRLGPVPSPRGARMPFQRDAHPSQQSMHSTVW
GAHSDHGGSSSTPGIGDIQWAKPAKRQRTDTGKRRPSHL
NT seq
6600 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccagcggggggccctccggcagctcgcggagctccccggcgacgtcgccgcgg
ccggagcagccgcagccggggaccccggcgtcggcgcagcagcagtcccagcagcagcag
ctagggtttaggagccagggaatgatgcatcaccacgaacagcagcaagcataccaatcc
ggtgcgccacctggcatgatgggaccaggcggcagcggtagcttccctcagtcctccagc
gcaatgccaccgttccagggtcagaggaacctgccgctatctggcggaccacagggcatg
gttggaggtcagatgcacaaccaggtggcaatgcagcaacaatacctgaagcttgcgatg
cagcagcagcagcagcagcagaaggtggcccagggtatgctcctccagcagcaggccaag
atgaatatgccggggtcatcatcaagagaccaagatatggttaacaaccctgccaagatg
caagagtttatggcccttcagatgtttaagcgacaggctgaacatattcagcagtcggag
aagcagaaagagcagggacaaccaagcagtaatgagcaaagaactggtgatatgaggcct
cctatgcctcctcaaggagtacctggacagcagttgccgtcagtgggtatgatcaggccc
atgcagccaatgcaaggccaggtgggcatgggcagtgccggtggtggcccattaacgcca
ttgcagtttcaagccatccaagcctgggcaaaggagaacaacttcgacctgtccaatcct
gcaaacatgagtgcgatttctcaactcctgccgatctggcagtccagcaggatggcagcc
atgcagaagcaaaatgaggcaagtatggctgcgcagcagcaagcaacgtcctcgcaaatg
aacagcgatgccccagggcatggcaatgttgccagtcagggtgccccattgaaggctagg
cagcccattcccccgagctcagtttctggtggagaagaggctaagatagtgaattcgagc
aacttgcagttgcaacaacagttatctgcccataacagggatggctcaaatgctgtgagg
ccacctatgacagtgggtaatggtgcacagacgatgcatatcccacagagttctgggcat
gtgaataaggttcctgagcaatccaatccaaaaaatgtccttgcaaattcagaagcggtg
cagatgcagcatgcgagacagatgcagcagcttaaccaagctgctgcccctacagcaacc
cctggcgaaacaggagggtcacaggccccaactccaagtgcccggccgcaaacggggcaa
acgggtttcacaaaaaatcaacttcatgtactgaaagctcagatattagcttttcggcgt
ttaaagcgtggtgatcgtacactcccaccagaagttcttgaattaattgtaactggacgg
cctcctgattcacaagggcagcagatttctggacctcaggcaacgcctaaccgcgaaagg
cctggtgtaagcaatgtggatgaacatggaaggcaaatggagactggtgataaagctcct
gaaaaacaggcattgttgaagggaccctgtttaccaaaggtggaagtttctgcttcagaa
gacaaagctagtcctgccagtggtcctggtcccatgcaagtgatgaaagcttctccgaaa
gagtctcttaaaattggaccagtttcagtaccagagcatagtaacaatactgtgattaaa
tccgagcaggatctagaacggggtatccagagaacacctgggagaagtgattacaatgct
gagaggggtaaatctttaccagcagaaagtgattcagtagatgctgagcagacaaaaagg
gcggcctcgacaagcagtgccccagttccaagagatgttcccagaaaataccatggtcca
ttattcgatttcccatccttcactaggaggcacgattccttgggacctgcaaattacaac
agtaatctgtcactaggttatgatgtgaaagatttattagctcaggaaggaatgatagtt
cttggtaagaaacgtgaggataacttaaaaaagataagtggtttgcttgctattaatcta
gagaggaaaagaatccggcctgatcttgtcttgaggctacagattgaagaaaagaagctc
aaactcctagaacatcaggctcggctccgagatgaagttgagcatgagcaacaagaaata
atggcaatgccagataggatatacagaaagtttgtcagacaatgtgaacgtcaacgtttt
gagcttgcaagacaagttcagcagatgcagaaagcctcgagagagaagcagctgaaatcc
attttccagtggcgcaagaagcttttggaggcacattgggccattcgtgatgctcgaata
actcgtaatcgaggggtggccaagtaccatgaaaggatgttgcgagaattctcaaagagg
aaagatgatgataggaacaaaagaatggaggcattgaaaaacaatgatgtggaaagatac
cgtcaaattttgttggaacagcaaactagtgttcctggtgatgcagctcaaagatacaat
gttctatcttctttcctgactcagactgaagagtacctttataagcttggaggaaaaata
actgctgccaagagtcagcaacaagtagaagaagcagcaaatgctgcagctgcagctgca
cgggcacagggtctatctgaggaagaagttaaggctgctgcacaatgtgctggtcaggag
gttatgataaggaacacattctctgagatgaatgcaccaagggataatacatcagttaac
aagtactacaatttagctcatgctgttagtgaaagtgttaccaagcagccatcactgttg
cgagcaggaactttaagggactaccaactggtgggcctacagtggatgctttctttgtac
aataataagttgaacggtattttggctgatgagatgggtctcggcaagactgtgcaggtt
atggcattgatcgcatacctgatggagtttaaagggaattatggcccacatctcataata
gtgccaaatgctgtcttggtcaattggaagagtgaactgctaaattggctgccatcagca
tcttgcatcttttacgttggtgcaaaggaccaaaggcagaagctgttctctcaagaggtt
atggccatgaaatttaatgttcttgtaacaacatatgaatttgttatgtttgaccgttcc
aagctttcaagggttgattggaagtacattataattgatgaggcgcagcggatgaaggac
agagactcagtcttggcgcgtgatcttgatcgctatcgctgccaacggcgcctccttctc
actggtactcctctacagaatgatctcaaggagctttggtccctcttgaacctgttgctt
ccagaagtatttgacagtagtaaggcatttcaagattggttctctaagccatttcagagg
gatggtcagacacatagtgaagaagaagatgattggcttgagacagagaagaaagtaata
atcattcacaggctgcatcagattttggaacctttcatgctacgtaggcgtgtggaagat
gttgaaggctcacttccacggaaggattctattgttttgaggtgtagaatgtctgccatt
caaggagctatatatgattggatcaaatctactggtactattagagttgatcctgaagat
gagaaacaacgtgcacaaagaaatcccatgtaccagttcaagacatacaagaacctcaac
aacaagtgcatggagctaagaaaagtttgtaaccatcctcttctgtcatatccattcttg
aatcatgggaaagattttatgatcagatcttgcgggaagttgtggaatcttgatagaatt
ttaattaagcttcatagggcaggccatcgtgttctcctttttagcacaatgacaaaactt
cttgacatcatggaagactatttgcaatggaggcgacttgtttacaggcgaattgatgga
acaacaagcttggaagatcgagagtcggcgattgttgacttcaacaggcctaattctgat
tgttttatattcttgcttagtattcgtgctgctggtaggggtctgaatcttcagagcgca
gacactgttgtaatatatgaccctgatccaaatccacaaaacgaagagcaagcagttgct
agggcccatcgtatagggcagactagggaggtgaaggttatttacatggaggctgttgtt
gataacatatctagttaccacaaagaggatgagttgagaaatggagggagtggagatttg
gaggatgatcttgctgggaaagataggtacatgggatcaattgagagtctcatccgcaac
aatatccaacaatacaaaattgatatggcagatgaggtcattaatgctggtcgttttgat
caaagaacaacccatgaggaaaggcggacgactttagagacactcctgcatgatgaagag
agatatcaagaaactgttcatgacgtgccttcattacaggaagtgaaccgaatgattgct
aggactgaacgtgaagttgaactttttgatcagatggatgaagactttgattggacaggg
gatatgatgaaacatcatcaggttccaaagtggcttcgtgttagctctactgaagtagat
gctgttgtggcaagtctatccaaaaagccgtctagaaatatgtcgtctggtggcattgct
ttagacactaatgatacacctgagaagagaaggggtcggccaaagggtactggcaagtat
tccatctacagggagattgatgatgaagatcttgaagaatcggatgaagattctgaagag
aggaatatcaccacacccctgcctgatgaaggggaaataggggaattcgaagatgaagag
gacaatgatgattcggtacctgataacaaggatgaatcagaggaagaagagcctatccat
gatggcaggtacaattttactgatggattaggtagcagaaaagctaacaggatggaagaa
gctggttccacaggttcttcttctggaagcaggagattaccaccacctgcaccttcctca
tcttcaaaaaaattgcggtccctatctgctctggatgcccgccctggttctttgtcaagg
agaactcctgatgacctagaggaaggtgagattgcaatgtcaggtgactcacatatggac
ctccagcagtcagggagctggaatcatgaacgtgatgacggtgaggatgagcaggtgttg
caaccaaaaataaaacgcaaaaggagtatccgtgttcgtccaagacctaatgcagaaaag
caggaagatagatctggcggagaaggggtcttcccccagcgtggtactcatcttacattt
caaggagattgtgattataattcacaatttaagtctgacctaggtgcccatccttttgct
gatccagctgccaggcagcaagacgcagttcatcctatagtcaaacagaagcgcaacatg
ccatctaagaaggtttcgcctgcttctaggacagggaaattgacttacttgtctggatct
ggtgaaggatctgctgaacgctccaaggaaaattggagcagtaaggccattgactctgct
tccccagagtaccgcggcacaaagatgtctgacagtatgcaaagaaagtgcaagaatgtg
ataagcaagctatggaggaggattgacaaagagggtcatcaaatcatacctaatatatct
tcttggtggaggaggaatgaaaattcctcattcagaggtccagctggtagcacccttgac
ctacagaaaattgaacagcgagttgatggattcgagtatagcgctgtaaccgagttcata
gcggacatgcagcagatgttgaagagtgtggttcagcatttcagctataggcatgaggtc
cggatagaagctgagaccctccataacttatttttcaacataatgaagattgccttccca
gactcagacttcagcgaagctaagaatgcgatgtcattttcgaatcctggaggagctgca
agtggcgttgctgggcagtcgacaaagcacgctgctttgggccataagcggcgtgctagc
accagtgaagcagagcagcatggttcgggacatagcaggcataatcagcctagcgaggtt
cctagccggcctcacagttccagatctgatagagattcgaggcattctggatctggcagc
agggatcaactcccggatggtgctgggttattgcacccaagcgatatgttcattgttaag
aagaaaagacaagaacggccaaggaacagcattggttctccatctagctcaggccgagct
gggccgctctcaccaaccaaccctgggcggctgggcccagtgccctcacctagaggtgcc
aggatgccattccaaagggatgcgcatccgtcccagcagtcgatgcattctactgtttgg
ggtgcgcattcagatcatggggggagttcctcgacacccggcattggggacatccagtgg
gccaagccagccaagcgacagaggactgacactggcaagaggcggccgagccatttgtga
DBGET
integrated database retrieval system
