Panicum hallii (Hall's panicgrass): 112895235
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Entry
112895235 CDS
T07366
Name
(RefSeq) crossover junction endonuclease MUS81-like isoform X1
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03440
Homologous recombination
phai03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112895235
03460 Fanconi anemia pathway
112895235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phai03400
]
112895235
DNA repair and recombination proteins [BR:
phai03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
112895235
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
EME1-MUS81_C
HHH_8
Motif
Other DBs
NCBI-GeneID:
112895235
NCBI-ProteinID:
XP_025818955
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Position
5:complement(1398382..1406075)
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AA seq
595 aa
AA seq
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MRPPAPKQAKPALPVPKQLKVQHPENEALSRFFLEKWRAMMQEPDGLSENNYLTIVKANR
SLCAAKEPIKTLRDFSKIKGVGQWLLRHMEGFFADSSQDLSSVKGKKTRGPKCYLPRKNT
AAYAILITLHRAKIRGKEFMMKQELIDAAEASGLSREAIGPNKSKAKQSFGKDWYTGWSC
VKTLMSKGLVIKRRSPAEYLLTGEGESTARDCLSRSGLDDSAGPLTMTNAHNASAASQVQ
TINYCDEGIICCDSDSEEPCRKNILLKGKGPTTDYGQPDYPVSVSPLSSQGIFELQFSST
MQGPAKFNMLDNDIAFTDKPMLAMPPRQSNEKFLDGYEVVFILDDREKFGSRSRKVADNI
CSQIHVPVEIRKLPVGDGIWIARHRKDHTEYVLDFIVERKEVLDLDGSIADSRYRDQKLR
LKRCGLRKLIYLVEGDPNHPDAPERIKTACFTTEILDGFDVQRTSGFADTQRRYGHLTRS
IIKYYDINFSTYAKTPHVCPTYDEFKRKCCDLEKTTVSEIFALQLMQVPQVTEEAALAVI
ELYPTPLFLAQAYSALDGDTHAQEEMLKNKSKMVNAGASRNIFELFCGDGRNVRN
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcggccgccggcgccgaagcaggcgaagccggcgctgccggtgccgaagcagctcaag
gtgcaacacccggagaacgaggcgctatctcgattcttcctggagaagtggcgggctatg
atgcaggaaccggacgggctctcggagaacaactacctcacgatcgtcaaggccaaccgg
agcctctgtgccgctaaggagcccatcaagacgctgagggacttctcgaagatcaagggt
gtcgggcagtggctcttaaggcatatggaagggttctttgcagactcaagtcaggactta
tcttccgtaaaaggaaagaaaacaagaggaccaaagtgctatttgccaaggaagaacact
gctgcttacgcaatactgatcacactccacagggcaaagattagaggtaaagaatttatg
atgaaacaagagcttattgatgctgccgaagccagcggtctgtcacgagaagcgatcggt
ccgaataaaagtaaagcaaaacagagttttgggaaggactggtatactggctggagctgc
gtgaagacattgatgtctaaaggacttgtcatcaagaggcgtagtccagctgagtatttg
ttaactggcgaaggggaaagcactgctcgtgattgcctttcacgatcgggattagatgat
tctgcagggcctttaacgatgaccaatgctcacaatgcatctgctgcaagtcaagttcaa
actattaattactgtgacgaaggaatcatttgctgtgattcagattcagaagaaccttgt
agaaaaaacattcttctcaaaggcaagggaccaactacagattatggacagccagattac
ccagtttctgtttctcctctatcatcccaaggaatatttgagctgcaattttctagtaca
atgcagggtcctgctaaattcaatatgctggacaatgatattgcattcacagacaagcct
atgctagctatgccaccgcgtcaatccaatgaaaaatttcttgatggttatgaagttgtg
ttcatactggatgatcgtgaaaaattcgggtctcgttcaagaaaagttgctgataacatt
tgttcacagatccatgtgcctgtagagattagaaagttacctgtgggtgatggtatttgg
attgctcgtcataggaaagatcacacagagtatgttcttgatttcattgttgaaaggaaa
gaggttttggatttagatggctcaattgcagacagcagatacagagatcagaaattaagg
ctcaagagatgtgggctaaggaagttgatatatcttgttgaaggtgatccaaaccatcca
gatgcaccagagaggattaaaacagcctgtttcaccactgagattctcgatgggtttgat
gttcagagaaccagtgggtttgctgatactcagaggagatatggccatcttacacgttca
ataatcaaatactatgatataaacttctcaacttatgctaaaactcctcatgtttgccca
acctatgatgagtttaagaggaagtgctgtgatcttgagaaaacaacagtgagcgaaata
tttgcccttcaacttatgcaggtgccgcaagtaacagaagaagctgcactagctgttata
gagctatatccaactcctttgtttctggcacaggcatactccgcacttgatggtgatacc
catgcacaagaggagatgttgaaaaacaagagcaagatggtaaatgcaggagcaagccga
aatatcttcgagcttttctgtggcgatggacggaatgttcggaactag
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