Panicum hallii (Hall's panicgrass): 112895253
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Entry
112895253 CDS
T07366
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phai03009
]
112895253
04121 Ubiquitin system [BR:
phai04121
]
112895253
Ribosome biogenesis [BR:
phai03009
]
Eukaryotic type
90S particles
Other 90S particles
112895253
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
112895253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Sof1
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WDR55
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_SCAP
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_IP5PC_F
Beta-prop_SPT8
Beta-prop_WDR41
PROPPIN
Beta-prop_NUP159_NUP214
VID27
Motif
Other DBs
NCBI-GeneID:
112895253
NCBI-ProteinID:
XP_025818982
LinkDB
All DBs
Position
5:59321599..59327714
Genome browser
AA seq
452 aa
AA seq
DB search
MRVKVISRSTEEFTRDRSQDLQKVFRNYDPGLRSQEKAVEYTRALNAAKLEKIFAKPFIG
AMDGHIDAVSCMAKNPNHLKAIFSGSMDGDIRLWDIAARKTVCQFPGHQGAVRGLTTSTD
GDLLVSCGVDCTVRLWKVPMLKMVDTSDHTGDTSQPSAVYTWKHAFWGADHQWDGNLFAT
VGAQVDIWDPNRSEPVNSFEWGKDTVLSVRFDPGDCNILITSASDRSLTLYDLRMSSPAR
KLIMKTRCNSVCWNPREPMNFTAANEDTNCYSFDARRLDEAKIVHKGHVSAVMDIDYSPT
GREFVTGSYDRTVRIFSYLGDHSREIYHTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWK
SKASEQLGVLLPRERKKQEYLDAVKERYKHLPEVKRIVRHRHLPKPIYKAANLRRTMIEA
ENRKEERRRKHSAPGSMPVQPFRKRRIIKEVE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgaaggtgatatcgcgctccaccgaggagttcacgcgcgaccgcagccaggac
ctgcagaaagtattccgcaactatgatccagggcttcgtagtcaagagaaagccgttgag
tacactcgggcacttaatgctgcaaagttagagaagatatttgctaagccatttattgga
gctatggatgggcatattgatgcggtatcatgcatggccaagaaccccaatcatttgaaa
gcaatattttctggttcaatggatggagatattcgcctttgggacattgctgcgaggaag
acagtttgccagttccctggacaccaaggtgccgtaagaggtctaacaacatctacggat
ggtgatcttcttgtatcatgcggcgtggactgcactgttcgactctggaaagttcctatg
cttaaaatggtggacactagtgaccatactggagatacttcccagccatcagcagtctac
acctggaagcatgcattctggggtgctgaccaccagtgggacggtaatctttttgctact
gttggtgctcaagttgatatatgggatcctaacaggtcggagccagtaaatagctttgaa
tggggtaaagatacagttctttccgtgcgctttgatcctggagactgtaatattttgatt
acatcggccagtgatcggagtctaacactttatgacctgcgcatgtcatctccagctaga
aagctaataatgaagacaaggtgcaattcagtatgctggaaccctagggagcccatgaac
ttcactgctgcaaatgaagacacaaactgctattcctttgatgctagaaggctagatgaa
gccaaaattgttcacaaaggccatgtttcagcagtgatggatatcgactactcaccaact
gggcgtgaatttgttactggttcctatgatcgaacagtaaggatttttagttatcttggt
gatcatagcagagagatttaccacaccaagaggatgcaaagggtattttgtgtgaagtac
acctacgacgggacatatctagtctctggcagtgatgatacaaatcttcggctgtggaaa
tccaaagcttcggaacaacttggagttcttcttccacgggagcgcaaaaagcaagaatac
ctggatgctgtgaaggagcggtataagcacctcccagaagtgaagcggattgtgcggcat
agacacctaccgaagccaatctacaaggcagccaacctgcggcgtacgatgattgaagcc
gagaaccggaaagaggagaggaggcgaaagcacagcgctccagggagcatgcccgtgcag
cccttccggaagcgaaggatcatcaaagaagtcgagtag
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