Panicum hallii (Hall's panicgrass): 112895287
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Entry
112895287 CDS
T07366
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112895287
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
112895287
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
112895287
NCBI-ProteinID:
XP_025819022
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Position
5:59228813..59233762
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AA seq
774 aa
AA seq
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MSSRMTPSKRLFQKNSSDHNGRGKWQKTKHSSSHKSQPKIEPGVPIFRILCPASKSGNVI
GRKGGIIAKIRQETGVRIRVDQAVLGCDERVVFISAIDKDEEAISEQGGENDGGVAVSAS
GDHEKDKVNSKKNNDDPEKNHSNQEKDDSERDYSNEEKDDSEKDNSKEQKDDPEKENGKE
HKDDSEKGHIEEENDDGSEKDHSKEENDASETGYSKEEKDASEKDHSKEEKEASEKDHSK
EEKDGPFVAKDIKLEPERVVPSALKAILFVFDRIFAADEDNETGDASGASAPVSLRLLVL
YSQAGWLLGKGGSVIKQMSVDNDCEIRVSKDKLPSCALPNDRLCQINGEVDSVRKGLNAV
AEVLLAHPPKETDVVAGVHSSGSSSRSLFSQSDGFASGMQSNFHIPLQGPTQANGPYDII
DRQPNMAPFPIGPEAPIHGHASVPIEALSFRLLCSKDKVGSVIGKGGNTVKTIQNDTGCE
IKVLETVPKTDGRIINISGPAHPGDGISPAQNAILHVQRKLMLPTSDKEGPAICRLIVSP
NQVGCLLGKGGSIMAEMRKLSGAFIVVLSKDKIPRGVPEDDEVIQISGGCEAIQEALMQI
TARLRNHLFRDRMPGMGPNMRPPFGLLDSQFGPCVGNHESPSLFDKDFMGRPLDGISAPW
TVKGMRGVGDPMSIPDIPGAGHRELGGFSGPGQSSVMPKVTAEVLVPRLVIPALCGEDGG
CLDRIREFSEAKITVAEPIADSMDTAVLISGTPDQMHAARSLVEAFVISESFGP
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcacgcatgacaccttccaagaggctgtttcagaaaaattcttcagatcacaat
ggccgaggcaagtggcagaagacaaagcattcttcttcacataaatctcagcccaaaata
gagcctggtgttccaatttttcgcattctctgccctgcttcaaaatctgggaatgtaatc
ggtaggaagggtggcattatcgcaaagatacggcaagaaaccggagtgagaatcagggtt
gatcaagcagtccttggttgcgatgagagagttgttttcatatctgccattgacaaggat
gaagaagctattagcgagcaaggtggagagaatgatggaggtgttgctgtttccgcttct
ggtgaccatgagaaggataaagtcaacagtaagaagaacaatgatgatccagagaaaaac
cacagtaaccaggaaaaagatgattcagagagagactacagtaacgaggaaaaggatgat
tcggagaaagacaacagcaaggagcagaaggatgatccagagaaagaaaatggtaaggaa
cataaggatgattcagagaaaggtcacattgaggaagaaaatgatgatggttcagagaaa
gaccacagtaaggaagaaaatgatgcttcagagacaggttacagtaaggaagaaaaggat
gcttcagagaaagatcacagtaaggaagaaaaggaggcttcagagaaagatcacagtaag
gaagaaaaggatggtccctttgttgcaaaagatatcaagttagaaccggagagggtagta
ccatcagcactgaaggccattttgtttgtcttcgacaggatttttgcagctgacgaggat
aatgaaactggggatgcatcaggtgcgagcgctcctgtttctttaagattattggtgcta
tacagccaagcaggttggcttttggggaagggtggtagtgtcattaagcaaatgtcagtt
gataacgactgtgaaatccgtgtttcaaaggacaaacttccatcatgtgcactacccaat
gacagactttgtcagatcaatggagaggttgactcagtaaggaaaggtctgaatgcagta
gctgaagtgctcttagctcatccgcccaaggaaactgatgtagttgctggtgttcattct
tctggatcatcatcacggtctttgtttagccagtcagatggctttgcttcaggaatgcaa
tccaacttccatatccccttgcaaggaccaacccaagccaatggaccttatgatatcatt
gatcgtcaaccaaatatggctccttttcctatcggacctgaagctccaatacacggtcat
gcctcagttcctatagaagccctctcctttaggttgctgtgttcaaaagacaaggttggc
agtgtaataggcaagggtggaaacactgttaaaactatccaaaatgatacaggctgtgaa
ataaaagttcttgagactgttccaaaaacagatggtcgcatcataaatatatctggacct
gcgcatccaggtgatggaatttcccctgcacagaatgccattttgcatgtgcagcgaaaa
cttatgttgcctacctctgataaggagggtcctgcaatatgtaggctgattgtttcacca
aaccaagttggttgccttctgggcaaaggtggtagtatcatggctgaaatgaggaagctt
tcaggagcatttatagtagtgttgagcaaagacaagatcccgaggggtgtcccagaagat
gatgaagttattcagataagcgggggctgtgaagctattcaagaagctctaatgcagata
actgctaggcttcgtaaccatcttttccgagacagaatgcctggaatgggtcctaatatg
cggccgccttttggtttgttagattctcagtttggtccttgtgtggggaaccatgaatct
ccatctctgtttgataaagattttatgggacggccattggatgggatctctgccccttgg
acagtgaagggcatgcgtggtgtcggtgatccaatgtcaatacctgatatccccggagca
gggcatagagaacttggtggattttctggtcctggtcagtcatccgtgatgccaaaagtg
actgcagaggtcttagttccaagattagttatccccgctctctgtggtgaagatggaggt
tgtttggataggattcgtgagttttcggaagctaagataacagtcgctgaacctatagct
gattcaatggacacggctgttttaatatctggcacaccagaccagatgcatgctgcccgg
agccttgttgaagcatttgttataagtgaatcatttggcccatga
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