Panicum hallii (Hall's panicgrass): 112895468
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Entry
112895468 CDS
T07366
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112895468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112895468
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112895468
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112895468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-TRAF
Motif
Other DBs
NCBI-GeneID:
112895468
NCBI-ProteinID:
XP_025819205
LinkDB
All DBs
Position
5:53978870..53980320
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AA seq
334 aa
AA seq
DB search
MSEQPKRVSTPENGHGGKRPRGLAAPDGGVKQERREQGQAEASQGGEGEGAVVAVQTMEE
PQINIRISVARLHCHACLLPLKPPTFKCEAGHIVCSTCRGGHGQVCDRAATHTAWVELDD
IVRDAKVPCAYSEYGCTSWVVYHEAADHHRSCRCGPCFCPNRDCELLTSPARLAEHLGTH
HAWPVTKIAYGKPCKVAVPGPQGGQVLVGETDGCVFLVSPCALGAATAVSLVCVRARGDA
AAGAPQFRCKLWVEVEGNKENLALVTSMVASSDLSGGFVAADQGMFLAVPPELLHDGSGE
APALMVRIDRAAAATGVARSPSATPPLRLAKRLQ
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagcagccgaagcgggtttccacgccggagaacggccacggcggcaagaggcca
agggggctggccgcacccgacggcggggtcaagcaggagcggcgagagcaagggcaagcg
gaggcgagccagggcggcgagggagagggggccgtggtggccgtgcaaaccatggaagag
ccgcagatcaacatcaggatctccgtcgcgcgtctccactgccacgcctgcctcctcccc
ctcaagccccccaccttcaagtgcgaggccgggcacatcgtgtgttccacctgccgcggc
ggccacggccaggtctgcgaccgcgccgccacccacaccgcctgggtcgagcttgacgac
atcgtgcgcgacgccaaggtgccctgcgcctactcggagtacggttgcacgagctgggtc
gtctaccacgaggcggcggaccaccaccggtcctgccgctgcgggccctgcttctgcccg
aaccgtgactgcgaactcctcacctcgccggcgaggctggccgagcaccttggcacccac
cacgcctggcccgtcaccaagatcgcctacgggaagccgtgcaaggtcgccgtcccgggg
ccgcagggcgggcaggtcctcgtgggcgagaccgacgggtgcgtgttcctggtgtccccg
tgcgcgctcggcgcggccacagccgtgtcgctggtgtgcgtgagggcgaggggcgacgcg
gccgcgggggcgccccagttccgctgcaagctctgggtggaggtcgagggcaacaaggag
aacctggcgctggtcacgtccatggtggccagcagcgacctgtccggcgggttcgtggcg
gccgaccagggcatgttcctggcggtgccgccggagctcctgcacgacgggtccggcgag
gcgcccgccctcatggtccgcatcgacagggccgccgcagccactggcgttgccaggtcc
ccgtccgcaactccgccgttgaggctcgccaagaggctgcagtaa
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