Panicum hallii (Hall's panicgrass): 112895573
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Entry
112895573 CDS
T07366
Name
(RefSeq) YJU2 splicing factor homolog
KO
K28527
splicing factor YJU2
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112895573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phai03041
]
112895573
Spliceosome [BR:
phai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112895573
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Saf4_Yju2
Benyvirus_14KDa
Motif
Other DBs
NCBI-GeneID:
112895573
NCBI-ProteinID:
XP_025819321
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All DBs
Position
5:complement(17004494..17009168)
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AA seq
328 aa
AA seq
DB search
MGERKVLNKYYPPDFDPSKIPRRRQPKNQQIKVRMMLPMSIQCATCGTYIYKGTKFNSRK
EDVVGETYLGIQIFRFYFKCTKCSAEITFKTDPQNSDYTVESGASRNFEPWREQDEAEDK
EKRKRDAEEMGDAMKALENRAMDSKQDMDILAALEEMRSMKSRHAGVSVDQMLEILKRSA
HEKEEKAIAELDEEDEELIKSITFRNSGFYVKRIEDDDDDDDDDNLVPGQSSITTKINGS
SESVTKPTDVLSKSNGSEGANKEGSKSWMPKLIVKPKSISAHPKRQKTESSAVQDNGKAP
VAEQKSEPAIQTNVLQSLCQNYDSGDSE
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagcgtaaagtgctgaacaagtactacccgccggacttcgacccgtcgaagatc
ccgcggcggcggcagcccaagaaccagcagatcaaggtgcgcatgatgctccccatgagc
atccaatgcgccacctgcgggacatacatctacaagggcaccaagttcaactccagaaag
gaggatgtcgtcggagagacatacttgggaatacaaatatttaggttttacttcaagtgc
actaagtgttctgctgagatcactttcaaaacagaccctcagaattctgactacacagtg
gaatcaggggctagtcgaaattttgaaccttggcgtgaacaggatgaggcagaagacaaa
gaaaagaggaagcgagatgctgaagagatgggtgatgcaatgaaagctctggagaataga
gcaatggactcaaagcaggatatggacatacttgctgcattagaagagatgcgctccatg
aagtctagacatgctggcgtctctgttgaccagatgcttgaaattttgaagcgttcagct
catgagaaggaggaaaaagcaattgcagagcttgatgaagaagatgaagaacttatcaag
tcaatcacttttcgaaactctggattttatgtaaagcggatagaagatgatgatgatgat
gatgacgatgacaatttggtcccaggccaatcgagcataacaacaaagatcaacggatct
tctgaatcagtgacaaagccaacagatgttttaagcaaatctaatggatcggagggtgcc
aataaagaagggagcaagagctggatgcccaaacttatagtgaaaccaaagtctatcagt
gcacatcctaagagacagaagactgaatcctcggctgtccaagacaacggcaaagcacca
gtagcagaacaaaagagtgaacctgcaatacaaaccaatgttctccagtccctctgccag
aactacgatagcggtgatagtgagtga
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