Panicum hallii (Hall's panicgrass): 112895595
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Entry
112895595 CDS
T07366
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03015
mRNA surveillance pathway
phai04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112895595
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
112895595
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phai01009
]
112895595
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112895595
03036 Chromosome and associated proteins [BR:
phai03036
]
112895595
Protein phosphatases and associated proteins [BR:
phai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
112895595
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
112895595
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
112895595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
112895595
NCBI-ProteinID:
XP_025819348
LinkDB
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Position
5:12402470..12405682
Genome browser
AA seq
500 aa
AA seq
DB search
MWKQFLHKLPRKSSASGKGDHAAGSSPGRNAAGNGSAIQRTSSCPSAGPARPAPGVKRMS
SAVFPSSVVAGIEPLVPFKDVPNGEKPNLFVSMVSLCCVVFDFSDPNKNSAEKDFKRQAL
VDLVDYVESASSCFTEPMVIACCRMFAINLFRVFPPNCRSSSSGGGEGEEEEPMFDPAWA
HLHLVYDLLLKFIGSSSLDAKVGKKYFDHTFIVKLLELFNSEDPRERDCLKTILHRIYGK
FMVHRPFIRKAVSNIFYHFVFETDRHNGIAELLEVFGSVISGFALPLKEEHKIFLWRVLI
PLHKPKTVGVYLQQLTYCVTQFVEKEPRLASSVILGLLRYWPITNSQKEVMFLSEIEEVL
EATNMVEFQKCMVPLFRRIAHCINSFHFQVAERALFMWNNDHIVSLVAQNRQAIVPIVTP
TLEENIQNHWNVSVLNLTANVKKMLSEMDEELFSTCLARHKEDGERQASLEQKRRLAWER
LESAAAFQPVTGNTAVLVSR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaacagttcctgcacaagctgcctaggaagtcctctgcctccgggaagggcgac
cacgccgcaggctctagtccggggcgcaatgctgccgggaacgggagcgcgatacagcgt
acgagcagctgcccgagcgccgggcctgcccgtcctgcgcccggcgtgaagcgcatgtcg
tccgcggtgttcccgtcgagcgtggtggctggcattgagccgctcgtgccgttcaaggat
gtcccgaacggggagaagccgaacctgtttgtcagcatggtgagcctgtgctgcgttgtc
tttgatttctcggaccccaacaagaattcagcggagaaggatttcaaaagacaggcattg
gtggatctcgtggattatgtcgaatctgctagctcctgcttcacggagccgatggttatt
gcctgctgcagaatgtttgctattaacttgttcagggtgttccctcccaattgcaggtcc
agttcatctggcggtggtgagggtgaagaggaggagccaatgtttgaccctgcatgggcc
catctgcatcttgtgtatgatctcctactgaaatttattggctcctcatctctggatgca
aaggtaggaaagaaatattttgaccacacattcatcgtaaagttgcttgagctcttcaat
tctgaggacccaagggaaagggactgcttgaaaacaatattgcatcggatctatggaaaa
ttcatggtgcaccgtcctttcatccgcaaagcagtgagcaatatattctaccattttgtg
tttgagactgatcgccataatggtattgcggaactgttggaggtttttggcagtgttatt
agtgggtttgcattgcctctgaaggaggaacacaaaatctttctttggagggtgctaatt
cctttacacaagccaaaaacagtcggtgtgtatctgcagcagctaacctactgtgtgacc
cagtttgtagagaaggagccaaggcttgcaagttcggtgatacttggcttgctcagatac
tggccaataacaaatagtcagaaagaggtaatgtttctgagtgagattgaagaggtcctg
gaggcaaccaacatggtcgaattccagaaatgcatggttccgttgttccgacgaattgct
cactgcatcaatagtttccacttccaggttgcagagcgagcactcttcatgtggaacaat
gaccacatcgtcagcttggtcgcacaaaaccggcaagcgatcgtgcccatcgtcacccca
acattggaagagaatatccagaaccactggaatgtatcagtcctaaacctgacagctaat
gtgaagaagatgctgtcagagatggacgaggaactcttctccacctgccttgccaggcat
aaggaagatggagagaggcaggcgtcgctggaacagaagcgaaggctggcctgggagcgg
ctagagtctgcggcagcgttccagccagtgactggcaacacagccgtcctggtgagccgc
tag
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