Panicum hallii (Hall's panicgrass): 112895655
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Entry
112895655 CDS
T07366
Name
(RefSeq) thyroid receptor-interacting protein 11-like
Organism
phai
Panicum hallii (Hall's panicgrass)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CENP-F_leu_zip
TACC_C
KIP1
Phage_GP20
Apolipoprotein
DUF1664
Motif
Other DBs
NCBI-GeneID:
112895655
NCBI-ProteinID:
XP_025819421
LinkDB
All DBs
Position
5:13577243..13585068
Genome browser
AA seq
1700 aa
AA seq
DB search
MTKKDKIRKSKHLLESKKDVDENVESILRMIGEENERTENEQEDSGNPVKKSKLSSLVKG
FHEDYQYLHKHYKHLISKLENVGHSSSDSDSSDSDMEGDRSDGDVITPKIAPNEENSLSH
SAEDHGVEAEIEKLKQTTEEQAKEISDLKQLLDKAIKDKEATRVELSSEVANLSSENENL
KSSVEIAKREEGELLNTVKSKESEVTTLSSEKQIIEKERDNLKMLIVDMEKEKEDLRNQL
KDTEDRCSLLSSEVEKAQHAEKEVQTLLEENQKLKNDNLILLNVHDNLKVLHQNLDIECS
QLKAANAETSAKNESLITENHSAERQLQQLGVEIDGLKVEAAELMNNLDKERSIAAEEKE
RLLSENSMHLNELEKAQSSVKDLEKELESTKNVLNSNIAELHKEKNSATFEIEQLEASLM
NLKTELAQQLERISDMQKSNEVLELANSNLHNEIVEVQGQKNEAVASVINLESKIEQQVQ
EVSNLQEANKDLKEAKTDLYNEVTTLQEEKNTALAQLQQSEANIKNLQSDLEQQQNQILF
FQRENEELQNKNSILHKQLEEIRTTLQDEIIVLQGEKEEAISSLQQSNDSVKTLGAQLKQ
RVEEISVLQFANGDLQNSNSNLKMQLEEAKFSHHAEILELQDEKNKIISDLQQSEASIKN
LRIELEQGKEQISVMNLADEDLKNNIAILDKQLQEARSSLHAEIAQLLAEKDTVLSELQM
SQASVRNLEGVLEKQSEKISTLDQANDQLQKNICTLTEQSEQTKAELQKEVEATREEKDT
ALTQLKQSETSVQNLENEVTRLKEELSVQLENNSTLDKQLEEVRSSMHAEIAELRAEKDA
SLSELQTSQASVMNLEIALQTQNENISTLQQANDELQKNICTLSEQLEQTKAELQQEVKA
TQEEKDAVLTQLKQSEDSVQNLAKEVAQLKDELSVQLENYSTLDKQFEEVRSSMHAEIAE
LHAEKDASLLELQTSQASVRNLEVALQTQNENISTLQQANDELQKNIRTLSEQTELAKAE
LQQEVKATQEEKDAVLTQLKQSEDSVQNLAKAVARLKDELSVQLENYSTLDKQLEEVRSS
MHAEIAELRAEKDTSLLELQISQASVRNLEIALQTQNENISTLQQANDELQKNICTFSEQ
TEQAKAKLQQEVKATQEEKDAVLTQLKQSEDSVQSLAKEVARLKDELSVQLENYSTLDKQ
LEEVRSSMHAEIAELRAEKDASLLELQTSQASVRNLEIALQTQNENISTLQQANDELQKN
ICTLSEKTEQAKAELQEEVKATQEEKDVVLIQLKQSEDSVQNLAKEVAWLKDELSVQLEN
NSTLDKQLEEAILNVSKLHENLEKVQAEAACQIDDMSTKTKYLEKTINLLSSEKTKLEED
LKIMVEACTVNMSFMTEFEDRVAQKISDHKAGLAVLHQSLRGAVSGCQRLQYAYHEVSSR
VSQLEILKRSQIEQIDQLQEKHTETLDKHRLLEEEKLSANKENTKLQKHVHDLEVQLQLA
KQKLKVTEAESKCKEDSYATAVETSQAEIRRLEQLVQQFSEKVSLLEEAFVQVKGNAESG
VSELASKLDEIESLFSQSFALFVDRSSACGEELKILRKKLHDHLDEQKELVKENDEIAAR
LREKEKLVSEMSKNAAEAEAKMVLLEKAVAEKEEELAARVQEKREAIKQLSDTIVYHKNY
SDDLVRYIRSHNRPRLPFCM
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagaaagacaaaattaggaagtccaagcatcttctggagagcaaaaaggatgtt
gatgagaatgtggagagcattttgcggatgataggagaggagaacgagcggactgagaat
gaacaagaggattctggaaatcctgtcaagaaatcaaagctgtcttccctcgtgaagggc
ttccatgaggactatcaatatcttcacaagcactacaaacacctaattagcaaactagaa
aatgttggccacagttcctctgattcagattcatctgactcagacatggaaggagacaga
tcagacggtgatgtcattacaccaaaaatagcaccgaatgaagaaaatagcctgagccat
agtgctgaggatcatggcgtggaggcagagattgagaagctgaaacaaactacagaagaa
caagccaaggaaatatccgatctgaagcagctactagataaagcaatcaaggataaagaa
gctacaagagtagagctaagttcagaggttgcaaacttgtcatctgagaatgaaaatctg
aaatcatcagttgaaattgcaaagagggaggaaggagaattgcttaacaccgtaaaatcc
aaggagagtgaggtgacaacattgtcaagtgagaagcaaattattgaaaaagagagagat
aacctgaagatgttaattgtagacatggagaaggagaaggaagatctgaggaatcagctg
aaagatacagaggacagatgcagcctcctgtcatcagaagttgagaaggcccaacacgct
gagaaagaagtgcagaccttgttggaagaaaaccagaagctgaagaatgataacttgatt
cttttgaatgtgcatgataacctgaaagtacttcatcagaatttagatattgagtgctct
caattgaaggcagccaatgcagaaaccagtgctaaaaatgaatccttgatcacagaaaat
cattcagctgaaaggcaactccagcaactgggggtggagatagatggcctgaaagtggag
gccgcagagctaatgaacaatctggacaaggaacgtagtattgcagcagaagaaaaagaa
agactactatcagaaaactccatgcacttgaatgagttagagaaagcacagtctagtgtt
aaggatctagaaaaggaactggaatcaacaaaaaatgttctgaatagtaatattgccgag
ctacataaggagaagaattcagccacgttcgagatagagcagctagaggcttctttgatg
aatcttaagactgagctagcacaacaacttgagaggatttcagatatgcagaagagtaat
gaagtcctggagctggcaaattctaacttgcataatgaaattgtagaagtacaaggacaa
aaaaatgaagctgttgcttctgttattaatcttgagagcaagatagaacagcaagtccaa
gaggtttcaaatcttcaggaggccaacaaagacctcaaagaagcaaagactgatctgtat
aatgaggttacaacactgcaagaggagaaaaatacagcactcgctcagctacaacaatca
gaggctaacatcaagaatcttcaaagtgacctggaacaacaacaaaaccaaattctattt
ttccagcgcgaaaatgaggaattgcagaataaaaattctatcttgcacaagcaactagaa
gagattaggactactcttcaagatgagatcattgtgctacaaggagagaaggaagaggcc
attagtagcctacaacaatcaaatgattcagtcaagaccctaggagctcagttaaagcag
cgtgtggaagaaatttctgttctgcagtttgctaatggggacctgcaaaatagtaactcc
aacctgaagatgcaattggaagaggcgaaatttagtcaccatgctgaaattttagaacta
caagatgaaaagaacaaaataatttcagatctgcaacagtccgaggcttctatcaagaat
cttagaattgaattagagcaaggaaaagagcaaatctcagtcatgaatctagctgatgaa
gatttgaagaacaacattgctatactggacaagcaattgcaggaggcccggagcagtttg
catgctgaaattgcacaactccttgcagagaaggacacagttttatcagagttacagatg
tctcaggcttctgtcagaaacttggagggtgtgctagaaaagcaaagtgagaagatttca
actctggatcaagctaatgatcagttacagaagaacatatgtaccttgaccgagcaatca
gaacaaaccaaggctgagctgcagaaggaggttgaggcaacacgagaagagaaggataca
gcactaacacaactaaagcagtcagagacttcagtacaaaatcttgagaatgaggtgaca
cgactgaaagaggaactttcagttcagctggaaaacaattccaccttggacaagcagttg
gaagaagtcaggagcagtatgcatgctgaaattgcagaactacgtgcagagaaggacgca
tctctatcggagttacagacatctcaggcttctgtcatgaacctcgagattgcacttcaa
acgcaaaatgagaacatttcaactctacagcaagctaacgatgagttgcagaagaacatt
tgtactttgtccgagcaattagaacaaaccaaggctgagctgcagcaggaggtcaaggct
acacaagaagagaaggatgcagtgctaacacagctgaagcaatcagaggattcagtacaa
aatcttgcgaaagaggtggcacagctgaaagatgaactttcagttcagctggaaaactat
tccaccttggacaagcaattcgaagaagtcaggagcagtatgcatgctgaaattgcagaa
ctacatgcagagaaggacgcatctctattggagttacagacatctcaggcttctgtcagg
aaccttgaggttgcgcttcaaacgcaaaatgagaacatttcaactctacagcaagctaat
gatgagttgcagaagaacattcgtactttgtccgagcaaacagaactagccaaggctgag
ctgcagcaggaggtcaaggctacacaagaagagaaggatgcagtactgacacagctgaag
caatcagaggattcagtacaaaatcttgcgaaagcggtggcacggctgaaagatgaactt
tcagttcagctggaaaactactccaccttggacaagcagttggaagaagtcaggagcagt
atgcatgctgaaattgcagaactacgtgcagagaaggacacatctctattggagttgcag
atatctcaggcttctgtcaggaaccttgagattgcgcttcaaacgcaaaatgagaacatt
tcaactctacagcaagctaatgatgagttgcagaagaacatttgtactttttccgagcaa
acagaacaagccaaggctaagctgcagcaggaggtcaaagctacacaagaagagaaggat
gcagtgctgacacagctgaagcaatcagaggattcagtacaaagtcttgcgaaagaggtg
gcacgactgaaagatgaactttcagttcagctggaaaactattccaccttggacaaacag
ttggaagaagtcaggagcagtatgcatgctgaaattgcagaactacgtgcagagaaggac
gcatctctattggagttacagacatctcaggcttctgtcaggaaccttgagattgcgctt
caaacgcaaaatgagaacatttcaactctacagcaagctaatgatgagttgcagaagaac
atttgtactttgtccgagaaaacagaacaagccaaggctgagctgcaggaggaggttaag
gctacacaagaagagaaggatgtagtgctaatccagctgaagcaatcagaggattcagta
caaaatcttgcgaaagaggtggcatggctgaaagatgaactttcagttcagctggaaaac
aattccaccttggacaaacagttggaagaagcaatactaaatgtttctaagctacatgag
aatctcgagaaggttcaggctgaagcagcttgtcaaattgatgacatgagtacaaaaaca
aaatatctggagaagacaatcaatctattgtcttctgaaaagaccaagttggaggaggat
ctgaaaattatggttgaagcatgcacagtaaacatgtcatttatgacagaatttgaagat
agagttgcacaaaaaatttcagatcataaggcaggacttgcagttctccaccagagcctg
agaggggccgttagcgggtgtcagaggcttcagtatgcatatcatgaggtgtcctcgagg
gtgtcccagctcgagatacttaagaggagtcagattgagcagatagatcagctacaggag
aaacacacagaaactttggacaaacatcgacttctggaagaggaaaaactatctgcaaat
aaggagaacacaaagctacaaaagcatgtccacgaccttgaagttcagctccagctagcc
aagcagaagcttaaagttaccgaggcagaaagtaaatgcaaagaagacagctacgcaacg
gcagtggagacatcacaggcagaaatccgtcgtcttgaacaactagtacaacagttttct
gaaaaagtcagcttgctggaagaagctttcgtgcaagtaaaaggaaatgcggagtcaggg
gtttccgaattggctagcaaattggacgagatagaatcactcttcagtcagagttttgcg
ctctttgttgaccgttcttctgcatgtggcgaagagcttaagatcctgaggaagaagctg
catgatcatcttgatgaacagaaagaacttgtcaaggagaatgatgaaattgctgctagg
ttgagagagaaagaaaagttggtgtcagaaatgtcgaagaatgcagcagaagcagaagcg
aagatggtcctgctcgagaaggcggtggcagagaaagaagaagagctagcagctagagtg
caggagaagagagaagccatcaagcagctcagcgatacgattgtttaccacaagaactac
agcgacgatctggtgcgctacatccgcagtcacaatcgccctcgcctcccattctgcatg
taa
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integrated database retrieval system
