Panicum hallii (Hall's panicgrass): 112895732
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Entry
112895732 CDS
T07366
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phai03009
]
112895732
Enzymes [BR:
phai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112895732
Ribosome biogenesis [BR:
phai03009
]
Eukaryotic type
Pre-60S particles
Helicases
112895732
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
112895732
NCBI-ProteinID:
XP_025819513
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All DBs
Position
5:complement(55720111..55723632)
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AA seq
643 aa
AA seq
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MATSSPAAAAAARGALTEQKFSEMSPTLSEEVVEALHRGGFRRCTPVQAATIPHLLSHKD
VAVDAATGSGKTLAFIVPVVEILRRRSSPPKSHEVLAVIVSPTRELSSQIYNVAQPFFAT
LKGVSSMLLVGGLDIKAELKRVDEEGANILVGTPGKLYDIMQREDALDFKNLEILILDEA
DRLLDMGFQKQVNFILSKLPKLRRTGLFSATQTKAVAELSKAGLRNPMRVEVKTEAKPTS
KDAGQQELGPSKTPLGLRLEYMICEASKKSSQLVDFLVQNNGKKIMVYFATCACVDYWAV
VLPLLNSLKGSPIIAYHGKMKQGPREKALASFSALSNGILVCTDVAARGLDIPSVDLIVQ
YDPPQDPNVFIHRAGRTARYDQEGDAIVFLLPKEDAYVEFLKLRGVPLTERECPSNTEDV
VPQIRSAALEDRNVMEKGLRAFVSFVRAYKEHHCSYIFRWKDLEIGKLAMEYGLLQIPSM
PEVKHHSLSLEGFIPVDDVDVTQIKYKDKAREKQRKKALKRKAEEEAQNPKPEKKRAREK
PEKPKRKKTGKQRQSVQTKEDLDELAHEYRLLKKLKRGDIDEDEYEKLTGFGDSDGEASD
GDASDLDEKERGNKAQKKLKQRGKGRGGARKFEGKSKMRSKRR
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggccacgtcctcgccggcggcggcggcggccgcgcggggcgcgctgacggagcagaag
ttctcggagatgtcccccacgttatccgaggaggtggtggaggcactacaccgcggaggc
ttccggcgttgcacgccggtgcaggcggcgaccatcccgcacctgctgtcacataaggac
gtcgcagtcgacgctgccaccggctccgggaagacccttgccttcattgttcccgtcgtc
gagatcctccgccgccgctcctccccgcccaagtcccacgaggttcttgctgtcatcgtc
tctcccacgagagaattatcctcacagatatataatgtggcgcagcccttcttcgcgaca
ctgaagggcgtgtcatccatgctcctggttggtgggctggacatcaaggcagagctcaag
agagtggacgaagagggtgcaaacatattggtgggcactcccgggaagttgtatgatatt
atgcagcgagaagatgctctagattttaagaatcttgagattttgattctggatgaggct
gataggctcttagacatgggattccagaaacaggttaatttcatactttcaaagttgccg
aagcttaggaggactgggttgttctcagctacccagacaaaagctgttgcggaactttcc
aaagcagggttgaggaatcctatgagggttgaggttaagacagaagcaaagccgacaagc
aaagatgccggtcagcaagagcttggtccatccaaaacaccattggggcttcggttggag
tatatgatatgtgaagcatcaaagaagtcgtctcagcttgttgatttccttgttcagaat
aatggaaagaaaataatggtatattttgcaacatgtgcttgtgtagattactgggctgtg
gttcttccactgcttaactcactaaaaggttctccaataattgcctaccatgggaagatg
aaacaggggcctcgagagaaagctttggcatcattttctgctctttcaaatggtattcta
gtctgcactgatgttgcagcaaggggccttgacataccaagtgttgatctgattgtgcag
tatgatccacctcaagatcccaacgttttcatacatagagctggtcgaactgcacgttat
gatcaggaaggagatgctattgtatttctcttaccaaaggaggatgcttatgttgagttc
ttgaagcttcgaggtgttcctctcacagaaagggagtgtccctcaaacactgaagatgtt
gtaccacagattagaagcgctgcactcgaagatcgcaatgtcatggaaaaaggacttaga
gcatttgtttcattcgttcgagcatacaaggagcaccactgctcttacattttcagatgg
aaagatcttgagattggaaagctagctatggagtatggtttactccagatcccatccatg
ccagaagtgaagcatcattctctttcattggagggatttattcctgtagacgatgttgat
gttacacaaatcaagtacaaggataaagctcgagaaaagcaacgcaagaaggcattgaaa
aggaaagcagaagaggaagctcagaacccaaagccagagaagaagagagctcgggagaag
cccgagaaaccaaagcgaaagaagacaggcaagcagcggcaatcggtccaaaccaaggag
gacctggatgagctggcgcatgagtacaggctcttaaagaagctgaagcgtggagacatc
gatgaagacgagtacgagaagctcaccgggttcggagactctgatggtgaagcctcagat
ggggacgcgagtgacttggacgagaaggagaggggcaacaaggcacaaaagaaactcaag
cagagagggaagggtagaggaggggctaggaagtttgaagggaagagtaaaatgaggagc
aaaaggagatag
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