Panicum hallii (Hall's panicgrass): 112895930
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Entry
112895930 CDS
T07366
Name
(RefSeq) sphingosine-1-phosphate lyase
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00600
Sphingolipid metabolism
phai01100
Metabolic pathways
Module
phai_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
112895930
Enzymes [BR:
phai01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
112895930
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Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Aminotran_1_2
Ku_PK_bind
Motif
Other DBs
NCBI-GeneID:
112895930
NCBI-ProteinID:
XP_025819726
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Position
5:complement(52747727..52753478)
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AA seq
535 aa
AA seq
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MEAAAELALRLRAAANGRLARYEPLALVAAPLLALLVARWVHAAASAVADRGLVAIAIAA
VKLLPGVSGYIAAEKKKVVDKMQSGGTSSKNNRRAELPTIGLGEEVIKDLETLKAKDVDW
QGKCSGTVYIAGSESEGHFELINKSYSMFSHTNPLHQDVFKSVANMEAEVVAMTAALLGS
KEKSSGGQVCGNMTSGGTESILLAVKTSRDYMRSKKGITKPEMIIAESAHSAYDKAAEYF
NIKVRRVPVNKEFLADVKGFKRCINGNTIMMVGSAPGFPHGLIDPIEELGELASRYDICL
HVDLCLGGFVLPFARKLGYPIPPFDFSVKGVTSISSDVHKYGLAPKGTSVVLYRNHEIRK
HQFVAVTEWTGGLYISPTIAGSRPGGLIAGAWAAMMSLGLNGYLDSTSRIMEVSKKIQRG
IEEIPGLFVIGKPDMTVVAFGSDVVDIFEVNDIMSSKGWHLNALQRPNSLHICVTLQHAT
VYNEFLKDLQDSVNTVKANPGPISGGMAPIYGAAGKMPDRGTVRELLVEFMDSSC
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcggcggagctggcgctgcgcctccgggcggccgccaacggccgcctcgcg
cgctacgagccgctggcgctcgtcgccgcgccgctcctcgcgctcctcgtcgcccgctgg
gtccacgccgcggccagcgccgtcgcggaccggggcctcgtcgccatcgccatcgccgcc
gtcaagttgctgccgggagtctccggctacatcgcggcggagaagaagaaggttgttgac
aagatgcaatctggtgggacctcgtccaagaacaaccggcgagctgagttgccgaccatt
ggccttggtgaggaagtgataaaggatcttgaaacgttgaaagccaaagatgtagactgg
cagggaaagtgctccggcacagtatatatagctggaagtgagtccgagggccattttgaa
ttgataaacaagtcttactctatgttttcacacaccaatcctctgcatcaagatgtattc
aagagtgtggcaaacatggaagctgaagtagttgcaatgacagctgctttgcttggcagc
aaagaaaaatcatccggtggacaagtttgcggcaacatgacatctggtggaactgaaagc
atattattagcagtcaaaacatcacgtgactatatgcgatcaaagaaaggaattacaaag
cctgaaatgataattgctgaatcagcacattctgcatatgacaaggctgctgaatatttc
aatattaaagtgcgtcgtgtgcctgtgaacaaagagtttcttgcagatgtgaaaggattc
aagcgatgcataaatggaaacaccataatgatggttggatctgcaccaggatttccgcat
ggtttaatcgatcctattgaggaactgggggaactggcttcacgctatgacatttgcttg
catgttgatttatgccttggtggcttcgtattgccttttgcccgtaagcttgggtaccct
attcctccttttgatttttctgttaagggtgttacgtcaatctcatcagatgttcataag
tatggattagccccaaagggcacaagtgttgtcctgtacagaaatcatgaaattagaaag
catcaatttgttgctgttaccgagtggaccggtggactttatatttctcccactattgct
ggaagcaggccaggtggattaattgcaggtgcttgggctgctatgatgtctcttggactg
aatggctacttggacagcacaagtcgtatcatggaggtttcgaaaaaaatacaaagaggg
attgaagagatcccaggactgtttgtgattgggaaaccagacatgaccgttgtggcattc
ggctcagatgttgtcgacatatttgaggtgaatgacataatgtcgtcgaaaggctggcac
cttaatgctctgcagagacctaacagtttacacatttgcgtgaccctccaacacgcgact
gtttacaacgaattcctgaaggatctgcaagattctgtgaacactgtgaaagcaaaccca
ggccctattagcgggggaatggctcctatctacggtgccgcagggaagatgccggacaga
ggcacggtgagggagcttcttgtggagttcatggacagctcttgctga
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