Panicum hallii (Hall's panicgrass): 112895996
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Entry
112895996 CDS
T07366
Name
(RefSeq) NF-X1-type zinc finger protein NFXL2
KO
K15683
NF-X1-type zinc finger protein NFXL1
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112895996
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
112895996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
Involucrin2
Motif
Other DBs
NCBI-GeneID:
112895996
NCBI-ProteinID:
XP_025819816
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Position
5:complement(55618655..55623855)
Genome browser
AA seq
929 aa
AA seq
DB search
MPSSYAAAAAGSSSRKPNRNPTAAAAAGSSSRKPNRTPTPTAAAATARPQAPSPSPSPAP
APPAANPSAASDSDPSSYSSSSGDEADLTASDSATASVVSAYLSVAGEGADLSKVGIFLS
SAARRRSPPCLICFDPIRPSDPVWSCSSSCFAILHLTCIQSWAHQSASGAAVPCPTWGCP
KCRFAYPKSQTPTSYLCFCSKTVDPTPDPWILPHSCGDVCGRRLNANLDSGCEHTCLLLC
HPGPCPPCPAVVPNAPCFCGVRREPRRCAHQRYSCLGKCNKRLSCGLHRCPVNCHDGPCP
PCAVRGKHKCECGETMEEKLCSERVFQCKRECGGMLDCGKHRCERGCHGGRCGECPLRGR
RTCPCGKKDYPKLECDAEAATCGSTCEKVLGCGRHKCPERCHRGPCDETCRLVITKSCRC
GGLKKEVPCYQELTCERKCQRLRNCGRHACKRRCCAGDCPPCSETCDRKLRCGNHKCLSP
CHRGACSPCPLMKTISCACGKTCFEVPCGTEKNQKPPKCSKKCNIPRLCRHKLECRPHKC
HYGACPPCKLTCGEEFSCGHICKERCHGPISPPNPEFTLKPTKKKMEKQIECTPGTPCPP
CKEVVLVPCFGQHLGQERAMPCSKWRPFPCQNLCGNPLLCGNHYCTKSCHVLEVPLNQPV
GDPIVSVSKENALAEPCEQCDLPCQRVREPPCSHRCPLPCHLSDCPPCKVLVKKPCHCGA
MVHAFECVFFNNLKAKEQLKVRSCGGPCHRKLPNCPHLCSEVCHPGTCPSVDQCMKKVNV
RCACNTLKQEWICQDVLKEYRNSGRDPKEVPKSQFGVGLLACGKDCKKKVKVPDPELHLR
KSQETKSPAVEVANVPKRRKRRDRGQEVKVSKFQEVKAYVLRVLLIILLSIIIAAGLYLL
WKGIFRLSDWMNEMEVQRARQRHPRGAML
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcctcctacgccgccgctgcggccggatcctcatcccgcaaaccgaaccgcaac
cccaccgccgctgccgcggccggatcctcatcccgcaaaccgaaccgcacccccaccccc
accgccgccgcagccaccgcccgcccccaagcgccgtcgccgtcgccgtcgccggcaccc
gctcccccggcagcgaaccctagcgcggcctctgactccgatccctcgtcctactcctcc
tcctccggggatgaggccgatctcacggcctccgactcggcgaccgcctccgtcgtctcc
gcctacctctcggtcgccggcgagggggccgacctctcgaaggtcggcattttcctctcc
tcggccgcgcgccgccgatcgccgccgtgcctgatctgcttcgaccccatccgcccctcc
gatccagtctggtcatgctcctcctcctgctttgccatcctccacctcacctgcatccag
tcatgggcccaccagtcagcctccggcgctgccgtgccgtgcccaacctggggctgccct
aagtgccgcttcgcctaccccaaatcgcagactccgacctcctacctctgcttctgctcc
aagacagtagacccgactccggacccctggatcctcccccactcctgcggcgacgtgtgc
ggccgccgcctcaatgcaaatctcgactccggatgtgagcacacctgcctactgctatgc
cacccggggccgtgtccaccatgccctgctgttgtccctaatgctccctgcttttgtggg
gtgcgccgggagcctcgacgctgcgcacatcagcgttactcttgtttggggaaatgtaac
aaacgtcttagctgtggactccaccggtgtccagtgaattgccatgacgggccctgcccg
ccgtgtgcagtgaggggaaaacacaaatgtgaatgtggagagacaatggaggagaaattg
tgctctgaaagggttttccagtgcaagagggagtgtggtgggatgttggattgcgggaag
cataggtgtgagagagggtgccatgggggtaggtgtggcgaatgtccacttcgaggtcga
cgcacttgcccatgtgggaagaaggattatccgaagttggagtgcgatgcagaggctgcc
acatgtgggtctacttgcgagaaagtgcttggttgtggacgacacaagtgccctgagcgg
tgccatcgtggtccttgtgatgagacttgccggcttgtgatcacaaagtcctgccgttgt
gggggtctgaagaaggaggtgccatgctaccaagaattgacgtgtgaaaggaaatgtcaa
cgtttgcgaaactgtggccgccatgcttgtaaacgacgttgctgtgctggcgattgtcca
ccctgctctgagacttgtgataggaagctcagatgtgggaaccataaatgcctttcacca
tgccacagaggtgcttgttcaccttgtcctctgatgaagactatttcatgcgcctgtggg
aaaacatgctttgaggttccttgtgggactgaaaagaatcagaaaccacccaaatgctca
aagaaatgcaatatacctcgcctttgcaggcacaagcttgaatgccggccccacaaatgc
cactacggagcctgcccaccttgcaagctgacctgtggagaagaattttcctgtggccac
atatgtaaagaaaggtgtcatggccctatttctcctccaaaccccgagttcacactaaaa
ccaacaaaaaagaaaatggaaaagcaaatagaatgtacacctggaacaccgtgcccacca
tgcaaagaggtggttttagtaccatgctttggtcagcatcttggccaagaacgcgctatg
ccttgttccaaatggaggccgtttccctgtcaaaatttatgtgggaatcctcttctttgt
ggcaaccattattgtacaaaatcttgccatgtgttagaggtcccattgaatcaacctgta
ggagatccaatagtatctgtcagtaaagagaatgcacttgctgagccttgtgaacaatgc
gatcttccttgtcaaagggttagggagcctccttgttcacatcgttgtcctttgccatgc
catctgagcgattgtccaccatgcaaagtccttgttaaaaaaccatgccattgtggtgct
atggtacatgctttcgagtgtgtgttttttaacaacctaaaagctaaagaacagcttaaa
gtaaggtcgtgtggtggcccatgtcataggaagctaccgaattgtccccatctgtgctca
gaagtatgtcaccctggtacatgcccatcggttgatcagtgcatgaaaaaggtcaatgta
cgttgtgcatgcaacacgctgaaacaagagtggatatgccaagatgtccttaaggaatac
cgtaattctggtcgtgatccaaaagaagtacctaaaagtcagtttggagttggcttgctt
gcttgtggcaaagactgcaagaaaaaggtgaaggtgccagatcctgagttgcatctccgt
aaaagtcaggagaccaagagccctgctgtggaagttgcaaatgtgcccaaacgcaggaag
cgacgtgaccgcggacaagaggttaaagtatcaaaattccaggaagtcaaggcctatgtg
ctgagggtgctactgattattttgctatccataatcatcgcagctggattgtacctgtta
tggaagggtatattccggctttctgactggatgaatgaaatggaggtgcagagggctaga
cagaggcatccgaggggtgcaatgttgtag
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