Panicum hallii (Hall's panicgrass): 112896512
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Entry
112896512 CDS
T07366
Name
(RefSeq) uncharacterized protein LOC112896512
KO
K18469
TBC1 domain family member 5
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112896512
Membrane trafficking [BR:
phai04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112896512
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
112896512
NCBI-ProteinID:
XP_025820292
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Position
6:complement(42621059..42626670)
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AA seq
821 aa
AA seq
DB search
MAEEERRRFANLRSVRWRVNLGILPASPEASVDELRRAAADSRRRYVSLKRRLMVDPHLP
KEEDRSSNLVVDNPLSQNPDSSWGRFFRGAELEKTVDQDLSRLYPEDGSYFQTPNCQSML
RRILLMWCLQHPECGYRQGMHELLAPLVYVLQVDIDKLSQVRKLHEDCFNDDFDGVPFPD
TDMVFSYKPRKDSKWHSRDDNGNDSERASKVNSLDELDMDTKEIILLSDAYGAEGELGVV
LSERFMEHDAYSIFDGLMDGGSGVVRMAEFFSASKVGSSSSLPPVIEASSSLFYLLSIVE
PSLHSHFIELDVEPQYFALRWLRVLFGREFCLNDLLVVWDEVFACSNDMLLRENEEYNFK
ILCSSRGAFIAAMAVSMILHLRSSLLATEINTSCLQRLLNFPNNVDVHKLIEKAKSLQSI
AIDANTTSPSFLSKKDSYDYDRVYSNLATSTPPRTPLHPLSESYWEEQWRNLHKDGAAPK
EIEKVQSYKRSLRKSLSQRLGLSRTESDPSPVKVVSEKNDTKSSVRRCLLNSYSDCEVAG
KIQHDEFPIISIHKEPAASAERPSHLKVKPASEILTVSQSSVTNVNPLIDSQSKSADESS
TKRVETCSSGESSPVFYAATAGNEPENCPDNDSERSSITSNSCAGDDDRDEVLQDESFSG
SCENKAALEAKTSEKNADPVGPSERSAVSNERKPFINKLQWFLRFGRPSGEGNVEKGSVE
ASDDKHGVVPPSASPPDVSLDNSRGGVNLASGDKKVMGTLKNIGQNMLENIQVIESAFQQ
ERGQPSAMENFSNNILGGKGQVTAMAALTELRKISNLLREM
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaggagaggcggcggttcgcgaatctgcgaagcgtccggtggcgggtcaat
ctcggcatcctgccggcgtcgcctgaggcctccgtcgacgagctccggcgcgcggccgcc
gattcgcggaggagatatgttagtttgaagcgccgccttatggtagacccacatcttcca
aaggaagaggacagatcatccaacctcgtcgttgacaacccgctctctcagaatccagat
agcagctggggccgtttttttagaggggctgagttggagaagactgttgaccaagacttg
tcccgattgtatccagaagatggtagttacttccaaacgcccaattgccagtccatgctg
agaagaatactgttaatgtggtgccttcagcacccggagtgtggatatcgccaaggaatg
catgaactactagctcctctagtgtatgttcttcaagttgacattgataagctgtctcaa
gtacggaagctccatgaggactgtttcaatgatgattttgatggagtgcctttcccagat
accgatatggttttcagttataaaccaagaaaggactcaaaatggcattctagagatgac
aatggcaatgattctgaaagagcttccaaagttaacagtcttgatgagcttgacatggat
acaaaagaaataattttacttagtgatgcgtatggggctgagggtgaactaggtgttgtc
ttatctgaaaggttcatggaacatgatgcctattcaatatttgatggtttgatggatgga
ggtagcggagtggttcgcatggcggagtttttctcagcatccaaggttggatctagctca
agccttccacctgttattgaagcctcatcatctttgttttatttgctttccattgttgag
ccatctcttcatagccatttcattgaactagatgtggaaccacaatattttgctcttcgt
tggctgcgggtcttgtttggacgagagttctgcctcaacgatcttttagtcgtgtgggat
gaagtttttgcttgttccaatgatatgctgcttagagaaaatgaagaatacaacttcaag
atcttgtgctcatctagaggggcattcattgcagccatggcagtctctatgattcttcac
cttagatcatctttgttggctactgaaatcaatacatcatgtcttcagagattactgaac
tttccaaacaatgttgacgtgcataagctaatcgagaaagccaaatctctgcagtccatt
gctattgatgcaaacacgacatctccatctttcctatcaaagaaggatagctatgattat
gatagggtttacagtaatcttgctacttcaactcctccaaggaccccattgcatccatta
tctgagagttactgggaagagcagtggagaaacctgcataaggatggagcagctcccaag
gagattgaaaaggttcaatcctacaagaggtcactaaggaaatctttgagccagaggctt
ggtttatctaggacagagtcggatccttctccagttaaggtagtcagtgagaagaatgac
accaagagttcagtgagacgttgtcttttgaattcctattcagactgtgaagttgctgga
aaaattcagcatgatgaattccctatcatctcaattcataaggagcctgctgcaagtgct
gaaaggccttcacatctaaaggtaaagccagcaagtgagattttaacagtaagtcaatca
agtgtgacaaatgtcaatcctcttattgactcacagtcaaaatctgctgatgagagttca
acaaaaagagtagaaacttgttcaagtggtgagagttctcctgtattttatgcggccact
gctggtaatgagcctgagaattgtcctgacaatgattctgagagaagtagcatcacttca
aattcgtgtgctggtgatgatgatagggatgaagttttgcaagacgagtcattcagtggt
agctgcgagaacaaagccgccttagaagcaaagacatctgaaaaaaatgcagatcctgtt
ggaccatctgagagaagtgcggtatcaaatgaaagaaagccgttcataaataagctacaa
tggttcttgaggtttggcagaccttcaggtgaaggcaatgtggagaagggcagtgttgag
gcatcggatgataaacatggtgttgttcctcccagcgcttcccctcctgatgtgagttta
gataactcccgtggtggcgtaaacttagcttctggtgataaaaaggtcatgggcaccctc
aagaacattggacagaacatgcttgaaaatatacaggtgatcgaatcagcgttccagcaa
gagcgtggccagcctagcgccatggagaacttctcaaacaacatcctgggaggcaaaggg
caggtgacggccatggcagccctgaccgagctccgcaagatcagcaacctgctccgcgag
atgtaa
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