Panicum hallii (Hall's panicgrass): 112896540
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Entry
112896540 CDS
T07366
Name
(RefSeq) exocyst complex component SEC8
KO
K06111
exocyst complex component 4
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112896540
Membrane trafficking [BR:
phai04131
]
Exocytosis
Tethering complex
Exocyst complex
112896540
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec8_N
Sec8_C
EXOC6_Sec15_N
Vps54_N
Motif
Other DBs
NCBI-GeneID:
112896540
NCBI-ProteinID:
XP_025820340
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All DBs
Position
6:24246226..24266140
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AA seq
1057 aa
AA seq
DB search
MSRGRRGIFDGLPIPADKSYLKEGLLRIDEGWAAARFDSLPHVVHILTSKDREGEIQFLK
EQSDLIEDVVDEVVHAYHHGFNKAIQNYSQILRLFSESADSITGLKGEMAEAKKLLGRKN
NHLGQLWYRSLTLRHVLSLLDQVEDVAKVPARIENLMAEKQLYAAVQLHVQSMVMLEREG
LQAVGALQDVRSDLTKLRGVLFYKILEELHGHLYNNGEYSSVTLSMVDNEEVPASTATGR
IVNSMQPLSRRTRSIKGDNHIGGLVTADGFPKTSSVDGGSSFDGPDDDSSLDMRETDGRA
RKDSKTISREIPIFLSCAAPDEFIDSMIKADAPLNVKYLRTLVQCLSMLGKIAAAGAVIC
QRVRPTIHDVITSKIKAYAEEASKSSTDKAAKRNSDGSHSDGPVPQFQMLKQKTKNGASV
MAAQLVVSPISPAMAPAGDAQHAAGQLLRTIFECLLDILENHIIVGDLLEEKSTSEVDNI
NTPHISNGDPSWNPDSESSQATGGFSVAFSLSVVQSECQQLLCEILRATPEAATADAAVQ
TARLANKDPVKEKRDGSEGLSFAFRITDAATTVPNEGQGWRRNSNVPQEGYGTASVIPDQ
GIFLAASVYRPVFEFMNKIGSMLPQKYSQLGSDGLLAFVNNFLKEHFLPAIFVDYRKCVQ
QAISSPAAFRPRVNATSVYGSSVEHGRPVLQGLLAVDIIAKEVLGWVQLMPNYATELVEY
VRTFLERTHERCRASYMEAVLEKQSYILLSRNDIESLMRLEPANNSLQNSTSQPENNVTD
AEAAEVEIELSDLLLDMCPIKQENLIHDDQKLILLASLSDSLEYLADSVVRLGESFVSPT
TSMSRNHSQHGQHARSSSAIPKGLASLANEYRRLAIDCVRVLRLEMQLEAIYHMQEMTKR
EYMEDQDAEDPDDFIISLTTQIARRDEEMAPYITESKRNYVFGGISSVAANASIKALAQM
KSINLLGVQQICRNSVALEQALAAIPSIDSEAVQQRLDRVRTFYELLNLPFESLLGFIAE
HEYLFSAKEYLSVLKVNVPGREIPMDAERRISQILGH
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgggcgccgcggcatcttcgatggcctccccattccggccgacaaatcctac
ctcaaggaaggattgttgcggatcgacgaggggtgggcggccgcgcggttcgactccctg
ccgcacgttgtgcacatcctcacctccaaggaccgcgagggcgagatccagttcctcaaa
gagcagagcgatctcattgaggacgtcgttgacgaggttgtgcacgcctaccaccacggc
ttcaacaaggccatccagaattactcccagatcctgcggttattcagcgaatctgcagat
agcattactggacttaagggagagatggcggaggccaagaagctgcttggcaggaagaat
aatcacctcggccagctgtggtaccggtccctcacgctacgccatgtcctctcccttttg
gatcaggtcgaggatgttgccaaggtccctgcccgaatcgaaaacttaatggcagagaag
cagctgtatgctgcagtgcagttgcatgtccaatcaatggtgatgctagagcgagaaggc
cttcaagcggtaggtgctcttcaagatgttcgttctgatctaacaaagctgcgaggtgta
ctattttacaaaattttggaagagttgcatggccatttgtacaacaatggagaatatagc
tctgtgactttgagcatggttgacaatgaggaagtaccagcttctacagctactgggcgc
atagtaaacagcatgcaacctctttcaaggagaactaggtcaattaaaggtgacaatcac
attggtggactggtgactgcagatgggtttccaaaaactagttctgttgatggaggctct
tcattcgatggtccggatgatgatagtagcttagatatgcgtgaaactgatggacgcgct
cggaaagattcgaaaactatttctcgtgaaatcccaatttttctttcctgtgctgcacca
gatgagttcattgattcaatgatcaaggcagatgccccccttaatgtgaaatacttgaga
acactggtacaatgcttatcaatgcttggaaagatcgcagctgcaggagctgtgatatgc
caacgagtacgccctacaatccatgatgttatcacttcaaaaattaaagcctatgctgaa
gaggcttcaaaatccagtacagacaaagctgcaaaaagaaattctgatgggtcacattca
gatggacccgttccccagttccagatgctcaagcagaaaacaaagaatggtgcatctgta
atggcagcgcaactagttgtcagtcccatttcgccagctatggcacctgcaggagatgct
cagcatgcagctggtcaacttcttagaacaatatttgaatgtcttttagacatacttgag
aatcatattattgttggggatcttcttgaagaaaaatcaacatcagaggttgacaacata
aacacaccacatatctcaaatggggatccaagctggaatccagactctgaatcttcccaa
gctactggtggttttagtgttgcattctctctgtcagttgtgcagagcgagtgccagcaa
cttctgtgtgaaattttgcgggcaactccagaagctgctaccgctgatgcagctgtccag
acagctaggcttgcaaataaggacccagtgaaggaaaagagggatggatcggaaggcctt
tcttttgcttttcgcattactgatgcagcaaccacagtgccaaatgaaggtcaaggatgg
cgaagaaattcaaatgtgccacaagaagggtatggaacagcaagtgtcatacctgaccaa
ggaattttcctagccgcatcagtttaccgtcctgtctttgagtttatgaacaaaatagga
tcgatgttgcctcaaaagtactcgcaacttgggagtgatggcttattggcttttgtaaat
aactttttgaaggagcacttcttgccagcaatatttgtagattaccgaaaatgtgttcag
caggccatatccagcccagcagcattcagaccacgtgtaaatgcaacctcagtatatggt
tcatcggtggaacatggacgtccagtgctacaagggcttctggctgttgatataatagct
aaagaggttcttggatgggttcaattaatgccaaactatgcgactgagcttgtggagtat
gtacgcacatttttagaacgtactcatgaaagatgccgtgcatcatatatggaggctgtc
cttgaaaagcaaagttatattctcctttcaaggaatgatattgaaagtttaatgcgcctg
gaaccagcaaacaattcattgcaaaactctactagccaacctgaaaacaatgttactgat
gcagaggcagccgaagtagagattgaattaagtgatctcttattagatatgtgcccaata
aaacaggaaaatttgatccatgatgaccagaaattgatcttgttagcttctcttagtgac
tcattggaatatctagctgattcagttgtaaggctcggggaatcattcgtaagtccaacc
acctcaatgagcagaaatcacagccagcatggtcaacatgcccgctcatctagtgcaatt
ccaaaaggtcttgcgtctctggctaatgagtacagaaggctagctattgattgtgtcaga
gtattgagattggaaatgcaacttgaggcgatatatcacatgcaggaaatgaccaaaaga
gaatacatggaagatcaagatgctgaagatcctgatgactttattatctcccttacaact
cagatcgcacgtcgggatgaagaaatggctccttacatcacagaatcaaaaaggaattat
gtatttggtgggatttccagtgttgctgctaatgcgtcaataaaggcactcgctcaaatg
aagtcaatcaacttgttaggagtccagcaaatatgcaggaactcggtagctctagaacag
gctcttgcggccataccctcaatagatagtgaagcagtccaacagagattggatcgtgtt
cgaacattctatgagttattaaatttgcctttcgagtctttgcttggattcatcgccgaa
catgaatatttattttctgcaaaagagtacttgagtgttctcaaggtcaatgtgcccggt
agagagatacctatggatgctgaacgacgcatctcacagattttgggtcactaa
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