Panicum hallii (Hall's panicgrass): 112896638
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Entry
112896638 CDS
T07366
Name
(RefSeq) general transcription factor 3C polypeptide 3
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phai03021
]
112896638
Transcription machinery [BR:
phai03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
112896638
TFIIIC, fungi type
112896638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_8
TPR_14
TPR_16
ANAPC3
TPR_1
TPR_7
TPR_CcmH_CycH
TPR_2
TPR_12
TPR_17
TPR_9
TPR_15
ARM_TT21_5th
TPR_11
TPR_6
ARM_TT21_4th
ARM_TT21_C
HEAT_Nup120
Alkyl_sulf_dimr
ARM_TT21_2nd
SNAP
TPR_EMC2
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
112896638
NCBI-ProteinID:
XP_025820466
LinkDB
All DBs
Position
6:complement(5100017..5114162)
Genome browser
AA seq
901 aa
AA seq
DB search
MSAMTAEAGDPERDVNEDFEEDDEDGFEFGDADEAMQCVEMAGRSTAAGALRAQGHDYEA
LVARKRKALSEDQPQREGSKKPRQNELSEAEAATMFDRLMEGFGLRRKRRSKEGKKRGRK
KGTKNKGSPEVIKKLGDATLLFAEEKFNEAIPILHEIVRIAPNLPDSYYLLGSIYNETGE
LDKAINFLMLAAYVSPKDASLWKKLIPLAKKKEDASLARHCILKAMRADPEDVDLKYLCA
DMYRNLRDYQKAAEIYEQIVGIYPANIAVRKVAAQMYRECGQIDKAINLLEDYVNTQTTN
TDWSVLDLLISLYLRNNAPSEALKQIKKARLQLRSQHKLPVQLQAKEVICHAYLGDMKHA
EIFLRDVHLEPSKDSTDVTKELASNLETMGLYEYAVKFYLMIGNIANHNDGSSYIDHKEL
GSSYVKVAQCYMVLEDKRNAIPYFYKALQSMKDNIDIRLTLSSLLIDEDKTDEAVTLLSP
PKNPELQSANTPDQQKPWWCDGRVKMQLAKIYYNKGKLEDFVDTIFHPILETLNVEYANR
KVRPMKKLTNTVLHERVKVLGEPRPDSIFQGLRPIASPGELQKANRAKKIMEKRAASNEE
LKPDDSQRTKQVPPLPGLLTNVEHHQLVLNLCRTLALLQRYWDALQIINRTLKLGNDLLT
DDNKEELKSLGAQIAYRAPDPSHGFKYVRYVVQQHPYSLSAWNSYYKVISRIEDRFPHHF
KYLLRTREEKPDCVAPIIISGHRFTAISQHQSAARDYLEAYKLDPENPLINLCVGTALIS
LALGFRLQNKNQCIIQAFAFLYRYLRLCGDSQEALYNIARAYHHIGLNTLSAVYYEKALA
IEEEDHPIPKLPYEAGSCTHEDLRPGYCDVRREAAFNLHLIYKKSGATDLARRILKTYCT
V
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctatgaccgcagaggctggggatcctgagcgcgacgttaatgaggatttcgag
gaggacgatgaggatgggttcgagttcggtgacgctgatgaggcgatgcagtgcgtggag
atggcggggcgcagcaccgccgccggggcgcttcgtgcgcaaggacacgactacgaggcg
ctcgtggcgcgcaagcgcaaggccctctccgaggaccagcctcagagggagggttccaag
aagccaaggcagaatgaactttcagaagcggaagcagcaaccatgttcgaccgactgatg
gaaggctttggtcttcggcgcaaaagaaggtcaaaagaaggcaagaagaggggaagaaag
aaaggaacaaagaataagggcagccctgaagttattaaaaagttgggtgatgctactcta
ctttttgctgaagaaaaatttaacgaggctattcctatactgcatgagattgtgcgaatc
gcaccaaatttgccagattcatattatctacttggtagtatttataatgagactggtgaa
ctagataaagccataaacttcttgatgcttgccgcatatgtctccccaaaggatgcatct
ctgtggaagaaactcattcccttggcaaagaaaaaagaagatgcttctctggcaagacac
tgcattttaaaagcaatgagagcagacccagaagatgtagatctgaagtatctttgtgct
gatatgtatcgtaaccttcgtgactatcagaaagctgcagagatatatgagcagatagtt
ggaatttatcctgccaatattgctgttcgtaaagtagccgcacagatgtacagagagtgt
ggtcaaattgacaaagctattaatttgttggaagactatgttaatactcaaactaccaac
actgactggagtgttctagatttgttgatatccctttatttgagaaataatgctcctagt
gaagcattaaagcagatcaagaaggcacgcctacagttgcgttctcaacataaattacca
gtacaattgcaggcgaaggaagtaatctgccatgcttatctaggagacatgaaacatgct
gagattttccttcgtgacgtgcacttggagccatcaaaagatagcactgatgtgactaag
gagctcgcaagcaatttagaaactatgggactatatgagtatgcagtgaagttttacctg
atgattggaaatattgctaatcataatgatggtagttcatatattgatcacaaagaattg
ggtagttcatatgtcaaagtcgctcagtgctacatggtcttagaggacaaaagaaacgcc
attccttatttttataaagccttacaaagcatgaaggacaatatcgatatacgattgacc
ttatcctctcttcttattgatgaggataagacagatgaagctgtcactttactttctcct
cccaaaaatccagagttgcagtctgctaacactccagaccaacaaaaaccttggtggtgt
gatgggagagtaaagatgcagcttgcaaaaatttattacaataaaggcaagctggaagac
tttgtggatacaatttttcatcctattctagaaacattgaatgttgaatatgctaatcga
aaggtcaggccaatgaaaaagcttacaaatactgttctgcatgaaagagttaaagtattg
ggggaaccacgtccagatagtatatttcaaggattaaggccaatagcatcacctggggag
ttacaaaaggcaaacagagcaaagaaaattatggagaaaagagcagcttcaaatgaggaa
ttaaaacctgatgattcgcaaagaacaaagcaagttcctcctcttcctggtctgttgaca
aatgtggagcatcatcaacttgtgctaaatctttgtcgaactttagctctgctgcagcga
tattgggatgcactgcagattatcaaccggactcttaaacttggaaatgatctactcaca
gatgacaacaaagaggaacttaaatccttgggtgctcaaatagcttatagagctccagat
cccagtcatggctttaagtatgtccgatatgttgttcagcagcacccatattctctctct
gcatggaattcctactacaaagtgatatcaagaatagaggacaggtttccacatcatttc
aaatatcttcttcgaacaagggaagaaaagcctgactgtgtggctcctataatcatatct
gggcatcgattcactgctataagtcagcatcagtcagccgcccgggattacctggaagct
tataaattggacccagaaaaccctcttattaatctctgtgtaggcactgccctgattagt
ttagcccttggcttcaggcttcagaataagaaccagtgcatcatccaagcttttgcattc
ctatatagatatctacgcctttgtggggatagtcaggaagccttgtacaacattgctcgg
gcatatcaccacattggcctgaataccttatcagctgtttattacgagaaggctttagcg
attgaggaggaagatcatcccatccccaagcttccgtacgaggctggttcatgcacgcat
gaggatctgaggccagggtattgtgatgtacgaagagaggctgccttcaatctgcatctt
atctacaagaaaagcggagcaaccgatctcgctaggcggattctgaaaacttactgtact
gtttag
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