KEGG   Panicum hallii (Hall's panicgrass): 112896644
Entry
112896644         CDS       T07366                                 
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
  KO
K16285  RING/U-box domain-containing protein [EC:2.3.2.27]
Organism
phai  Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:phai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:phai04121]
    112896644
Enzymes [BR:phai01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112896644
Ubiquitin system [BR:phai04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    112896644
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4 zf-RING_11 zf-C3HC4_2 zf-RING_5 zf-rbx1 zf-RING_UBOX zf-C3HC4_3 zf-RING_16 zf-ANAPC11 Prok-RING_4 zf-C3HC4_4 RINGv zf-Vps39_C zf_RING_Vps8 zf-RING_Vps41 U-box_ZFPL1 FANCL_C zf-Nse zf_RING_Vps8_fungal zf-RING_4
Other DBs
NCBI-GeneID: 112896644
NCBI-ProteinID: XP_025820472
LinkDB
Position
6:complement(41158235..41159278)
AA seq 163 aa
MGISSMPTPKDSLMGFVLYNTAVSVAILAGLVRAALVFLGLAAPSPWEGLAASDEHHHHR
QVVSSITPLGPSLADRFRSRFRPSRFGRRRGGAGADCRVCLARFEPESVVNRLPCGHLFH
RACLETWLDYDHATCPLCRLRLLPPAAGDDYAAVAAAAPAVRF
NT seq 492 nt   +upstreamnt  +downstreamnt
atgggcatctcgagcatgccgacgcccaaggacagcctgatggggttcgtcctgtacaac
acggcggtgtcggtcgcgatcctggcggggctggtgcgcgcggcgctggtgttcctgggc
ctggccgcgccgtcgccgtgggagggcctcgccgcctccgacgagcaccaccaccaccgc
caggtggtgtcgtcgatcacgcccctgggtccgagcctcgcggaccggttccggagccgg
ttccgcccgtcgcggttcgggcggcggcgcggcggcgccggcgcggattgccgcgtgtgc
ctggcccggttcgagccggagtcggtggtgaaccggctcccctgcgggcacctcttccac
cgggcctgcctggagacctggctggactacgaccacgccacctgcccgctctgccgcctc
cgcctcctcccccccgccgctggcgacgactacgccgccgtggcggcggcggccccggcc
gtccggttttag

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