Panicum hallii (Hall's panicgrass): 112896739
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Entry
112896739 CDS
T07366
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like isoform X1
KO
K12897
transformer-2 protein
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112896739
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phai01009
]
112896739
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phai03041
]
112896739
Protein phosphatases and associated proteins [BR:
phai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112896739
Spliceosome [BR:
phai03041
]
Common components
Common spliceosomal components
SR proteins
112896739
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
112896739
NCBI-ProteinID:
XP_025820642
LinkDB
All DBs
Position
6:34214587..34219819
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AA seq
284 aa
AA seq
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MSQTKEVRYTARSITPPADRNGTSRSPPPKRRSPSRSPPPKSTSRSPRPRSPKRRSTSRS
PPPRRRGRSRSRSRDRSRSRSEDDRNPGNNLYVTGLSTRVTEDDLEKFFNKEGKVKNCHV
VLDPRTKESRGFAFVTMDTVEDARRCIKYLHRTVLEGRLVTVEKAKRTRERTPTPGKYCG
RRGGSQRRSRSPSPYRSRRRERSRSRDRKRERSPSRDQRERSRSRERRRERSRSRDRRDR
SRSRDRRRDSRSRDRRRERSRSRDSRRRGDRSRSPAGNGNHKTD
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagacgaaggaagtgagatacactgcacggtctattacacctcctgcagataga
aatggaacttcaaggtcgcctcctccaaagagacgcagcccttcaaggtcgcctcctcca
aagagtacctcaaggtctccacgtccaagaagtcctaaacggcggagcacctcaaggtca
cctcctcctaggagacgtggtagatcgaggtcaaggtcaagggataggagtcgatccagg
agcgaagatgatagaaatccagggaataacctttatgtgactggattgtctactcgtgta
actgaagatgatctcgagaagttttttaataaagaaggaaaggttaaaaactgtcatgtt
gttctcgatcctcgcacaaaagaatcccgtggctttgcctttgtgactatggatactgtt
gaagatgcaagacgctgcatcaagtacctgcaccgcactgtacttgaaggtcgtctggtc
actgtagagaaggctaaaaggactcgagaaaggacccctactcctggaaaatactgtggt
cgaagaggaggatctcaaaggcgctctaggagcccatcaccataccgttctcgcagaagg
gagcggtctcgttcaagggaccgcaaaagggagcggtctccctcgagggatcagagggaa
cggtctcgctcaagggaacgcagaagggaaaggtctcgctccagggaccgaagggaccgg
tctcgctcaagggaccgccgaagggactcgcgctcaagggaccgcaggagggagcgctca
cgctcaagggactcgagaaggcgtggagatcggtccaggtcaccggctggcaatgggaac
cataagacagactag
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