Panicum hallii (Hall's panicgrass): 112896740
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Entry
112896740 CDS
T07366
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phai03041
]
112896740
Spliceosome [BR:
phai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112896740
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
MUCL1
Motif
Other DBs
NCBI-GeneID:
112896740
NCBI-ProteinID:
XP_025820645
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All DBs
Position
6:38260294..38265630
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AA seq
463 aa
AA seq
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MPSGSATQFRYTQTPSKVLHLRNMPWECTEEELVELCKPFGRVVNTMCNVGANRNQAFVE
FADQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEITNNKGTGDSSGNVLLVTFEGVQ
PNDVTIEVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPKYLL
PEHISACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPVNQTAIEGIVQPTVGPDGKIKEP
ESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAMFEKNGGMQALIQYPDITTAAVAKQ
ALEGHCIYDGGYCKLHLSYSRHTDLNVKAHDERSRDYTLSDPNAQLQAAAQPPALSTPGV
AWQNTAAPAAPFYASTAASTPAGVGQVPGWNPNMQAGAFASASTPYPSQPMMANSMPHYP
AIGTSSGAPPVPFQASQQMPQYGIPPGAPPHAPPAGQPMYFPK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcggggtcggcgacgcagttccgctacacgcagacgccgtccaaggtgctgcac
ctgcggaacatgccgtgggagtgcactgaggaggagctcgtcgagctctgcaagcccttc
ggcagggtcgtcaacaccatgtgcaacgtcggcgccaaccgcaaccaggccttcgtcgag
tttgcggatcaaaaccaggcaatttcaatggtttcctattacgcttcatcttccgaacct
gctcaagttcgtggtaaaactgtatatatccaatattcaaacaggcaagaaattaccaac
aataaaggcactggtgattcttctggcaatgtcctgcttgtcacttttgaaggtgttcag
cctaatgatgttaccatagaagtcattcatttggtattttcagcatttggatttgttcac
aagatagctacttttgagaaagcagctggtttccaggcacttatccagtatactgatgcc
ccaactgctcttgaagctaaaaactcattggatggaagaagcattccaaaatacttactt
ccagaacatatcagtgcctgccacatgcgcataaccttttctgcgcacaaggatttgaat
atcaaatttcagtcacaccgcagcagggattacactaatccttatcttcctgtgaaccaa
actgcaattgaggggattgtgcagcccacagtaggccctgatggaaagataaaggagcct
gagagcaatgtacttctagcatcaattgagaacatgcagtatgctgtgacagtcgatgtt
ctgcacactgtgttttctgctttcggtactgttcaaaaaattgcaatgtttgagaagaat
ggtggaatgcaggctttaattcaatatccagatataacaactgcagcagttgctaaacaa
gccctggagggacactgcatatatgatggtggttactgtaagcttcatctgtcatactct
cgtcatactgatctcaatgtaaaggcgcatgatgagagaagcagggattacactctttca
gaccctaatgctcaactgcaagctgctgcacaaccaccagctctaagcactccaggagtg
gcatggcagaacactgctgcgccagctgctccgttttatgcaagcacagcagcatcaact
cctgctggagttggacaagtgcctggttggaatcctaacatgcaggcaggggcttttgca
tctgcatccactccgtacccgagccaaccaatgatggcaaactccatgcctcactatcct
gctattggaaccagctcgggcgccccaccggtaccatttcaggcgtcacagcagatgccc
cagtacggcatcccccctggtgctccgccgcatgcacctccagctggccagccaatgtac
tttccgaaataa
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